Variant report

Variant	rs71292768
Chromosome Location	chr8:104001035-104001036
allele	-/CACA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs55649874	0.83[ASN][1000 genomes]
rs57059899	0.83[ASN][1000 genomes]
rs57205128	0.83[ASN][1000 genomes]
rs72667281	0.83[ASN][1000 genomes]
rs72667282	0.83[ASN][1000 genomes]
rs72667289	0.83[ASN][1000 genomes]
rs72667301	0.83[ASN][1000 genomes]
rs72669305	0.83[ASN][1000 genomes]
rs73288580	0.83[ASN][1000 genomes]
rs7844885	0.83[ASN][1000 genomes]
rs7844974	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33118	chr8:103358567-104068172	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
2	nsv611831	chr8:103995624-104002664	Weak transcription Enhancers Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:103990400-104011400	Weak transcription	Placenta	Placenta
2	chr8:103993400-104012400	Weak transcription	Spleen	Spleen
3	chr8:103996000-104001400	Weak transcription	Primary B cells from cord blood	blood
4	chr8:103996400-104001400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr8:103996400-104001800	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr8:103996400-104003200	Weak transcription	Primary hematopoietic stem cells	blood
7	chr8:103996400-104003200	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr8:103999000-104003800	Weak transcription	Gastric	stomach
9	chr8:103999200-104001400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr8:103999200-104002600	Weak transcription	Primary B cells from peripheral blood	blood
11	chr8:103999600-104001400	Weak transcription	Brain Substantia Nigra	brain
12	chr8:104000000-104007000	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr8:104000200-104006800	Weak transcription	Fetal Muscle Leg	muscle
14	chr8:104001000-104001400	Weak transcription	Fetal Brain Male	brain
15	chr8:104001000-104001600	Weak transcription	Primary monocytes fromperipheralblood	blood
16	chr8:104001000-104007000	Weak transcription	Brain Hippocampus Middle	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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