Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1003150	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11159480	1.00[ASN][1000 genomes]
rs11625251	0.91[CEU][hapmap]
rs12897126	1.00[ASN][1000 genomes]
rs17111140	1.00[ASN][1000 genomes]
rs179244	1.00[ASN][1000 genomes]
rs179250	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs179253	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs179256	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs179258	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs179259	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs179260	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs179261	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2024428	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28699303	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4903960	0.80[EUR][1000 genomes]
rs59549907	1.00[ASN][1000 genomes]
rs61738571	1.00[ASN][1000 genomes]
rs6574616	0.81[EUR][1000 genomes]
rs7145701	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7155069	1.00[ASN][1000 genomes]
rs726019	0.91[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73344664	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81453400-81455600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr14:81455000-81455600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr14:81455000-81455600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr14:81455000-81455800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr14:81455000-81455800	Enhancers	Osteobl	bone
6	chr14:81455200-81455800	Enhancers	Fetal Thymus	thymus
7	chr14:81455200-81456000	Enhancers	Primary B cells from peripheral blood	blood
8	chr14:81455400-81456200	Genic enhancers	Dnd41	blood
9	chr14:81455400-81463800	Weak transcription	Thymus	Thymus

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