Variant report

Variant	rs7148976
Chromosome Location	chr14:70982376-70982377
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs2233134	1.00[EUR][1000 genomes]
rs2332427	1.00[EUR][1000 genomes]
rs36045882	1.00[EUR][1000 genomes]
rs55945353	1.00[EUR][1000 genomes]
rs57439677	1.00[EUR][1000 genomes]
rs60541388	1.00[EUR][1000 genomes]
rs61734856	1.00[EUR][1000 genomes]
rs73290343	1.00[EUR][1000 genomes]
rs73290384	1.00[EUR][1000 genomes]
rs73290386	1.00[EUR][1000 genomes]
rs73291971	1.00[EUR][1000 genomes]
rs73291974	1.00[EUR][1000 genomes]
rs73291978	1.00[EUR][1000 genomes]
rs73292002	1.00[EUR][1000 genomes]
rs73293944	1.00[EUR][1000 genomes]
rs73293959	1.00[EUR][1000 genomes]
rs8006905	1.00[EUR][1000 genomes]
rs8008053	1.00[EUR][1000 genomes]
rs8010913	1.00[EUR][1000 genomes]
rs8011142	1.00[EUR][1000 genomes]
rs8014629	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv565042	chr14:70951234-71011734	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1050615	chr14:70954149-71013235	Weak transcription ZNF genes & repeats Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv2763072	chr14:70954149-71013247	Strong transcription ZNF genes & repeats Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70958600-70989000	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr14:70958800-70993800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr14:70968600-70989400	Weak transcription	Pancreas	Pancrea
4	chr14:70973400-70985200	Weak transcription	Left Ventricle	heart
5	chr14:70975800-70990000	Weak transcription	Rectal Smooth Muscle	rectum
6	chr14:70978200-70986600	Weak transcription	Liver	Liver
7	chr14:70978600-70985000	Weak transcription	Aorta	Aorta
8	chr14:70978800-70983000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr14:70978800-70988600	Weak transcription	Ovary	ovary
10	chr14:70979200-70986800	Weak transcription	Primary T cells from cord blood	blood
11	chr14:70980000-70989400	Weak transcription	Brain Angular Gyrus	brain
12	chr14:70980400-70982600	Enhancers	Primary hematopoietic stem cells	blood
13	chr14:70980400-70982800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr14:70980400-70983200	Enhancers	Primary hematopoietic stem cells short term culture	blood
15	chr14:70980600-70982400	Enhancers	Dnd41	blood
16	chr14:70981000-70989400	Weak transcription	Brain Substantia Nigra	brain
17	chr14:70981000-70989600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr14:70981200-70994400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr14:70981800-70982600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr14:70981800-70984800	Weak transcription	HSMMtube	muscle
21	chr14:70982000-70982800	Strong transcription	Stomach Smooth Muscle	stomach
22	chr14:70982000-71003600	Weak transcription	HSMM	muscle

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