Variant report

Variant	rs61734856
Chromosome Location	chr14:70925656-70925657
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:70921254..70923953-chr14:70924960..70926832,2	MCF-7	breast:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10083311	1.00[EUR][1000 genomes]
rs10083458	1.00[EUR][1000 genomes]
rs10130187	1.00[EUR][1000 genomes]
rs10130290	1.00[EUR][1000 genomes]
rs17108057	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2233133	1.00[AMR][1000 genomes]
rs2233134	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2332427	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28380137	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28437734	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28545330	1.00[EUR][1000 genomes]
rs36045882	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55945353	1.00[EUR][1000 genomes]
rs57439677	1.00[EUR][1000 genomes]
rs60541388	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7148976	1.00[EUR][1000 genomes]
rs73290343	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73290384	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73290386	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73291971	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73291974	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73291978	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73292002	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73293944	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73293959	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8006905	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8008053	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8010913	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8011142	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8014629	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9671437	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv976352	chr14:70924060-70926861	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70910600-70955600	Weak transcription	Left Ventricle	heart
2	chr14:70917000-70940200	Weak transcription	Aorta	Aorta
3	chr14:70921800-70940000	Weak transcription	Psoas Muscle	Psoas
4	chr14:70922000-70927200	Weak transcription	HSMMtube	muscle
5	chr14:70925400-70925800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr14:70925400-70925800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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