Variant report

Variant	rs2233133
Chromosome Location	chr14:71063228-71063229
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:71057525..71060066-chr14:71062663..71064760,2	K562	blood:
2	chr14:71060891..71063654-chr14:71065972..71067588,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000133997	Chromatin interaction

rs_ID	r²[population]
rs11158860	1.00[ASN][1000 genomes]
rs11620719	1.00[ASN][1000 genomes]
rs11621163	1.00[ASN][1000 genomes]
rs11621190	1.00[ASN][1000 genomes]
rs11621272	1.00[ASN][1000 genomes]
rs11621607	1.00[ASN][1000 genomes]
rs11622793	1.00[ASN][1000 genomes]
rs11622815	1.00[ASN][1000 genomes]
rs11624147	1.00[ASN][1000 genomes]
rs11624502	1.00[ASN][1000 genomes]
rs11626039	1.00[ASN][1000 genomes]
rs11628707	1.00[ASN][1000 genomes]
rs11629269	1.00[ASN][1000 genomes]
rs11846101	1.00[ASN][1000 genomes]
rs11850498	1.00[ASN][1000 genomes]
rs17108204	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17108240	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs17108244	1.00[ASN][1000 genomes]
rs17108245	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs17176341	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17765916	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17766006	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17766042	1.00[ASN][1000 genomes]
rs2153113	1.00[CEU][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2233134	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs2332427	1.00[AMR][1000 genomes]
rs2877683	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57974328	1.00[AMR][1000 genomes]
rs60541388	1.00[AMR][1000 genomes]
rs61734856	1.00[AMR][1000 genomes]
rs61977554	1.00[ASN][1000 genomes]
rs61977555	1.00[ASN][1000 genomes]
rs61979068	1.00[ASN][1000 genomes]
rs61979070	1.00[ASN][1000 genomes]
rs61979071	1.00[ASN][1000 genomes]
rs61979072	1.00[ASN][1000 genomes]
rs61979075	1.00[ASN][1000 genomes]
rs61979076	1.00[ASN][1000 genomes]
rs61979077	1.00[ASN][1000 genomes]
rs61979078	1.00[ASN][1000 genomes]
rs61979100	1.00[ASN][1000 genomes]
rs61979101	1.00[ASN][1000 genomes]
rs61979102	1.00[ASN][1000 genomes]
rs61979103	1.00[ASN][1000 genomes]
rs61979104	1.00[ASN][1000 genomes]
rs61979105	1.00[ASN][1000 genomes]
rs61979106	1.00[ASN][1000 genomes]
rs61979107	1.00[ASN][1000 genomes]
rs61979126	1.00[ASN][1000 genomes]
rs61979133	1.00[ASN][1000 genomes]
rs61979135	1.00[ASN][1000 genomes]
rs61979136	1.00[ASN][1000 genomes]
rs61979137	1.00[ASN][1000 genomes]
rs61979139	1.00[ASN][1000 genomes]
rs61979141	1.00[ASN][1000 genomes]
rs6573970	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7158477	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7160692	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73290343	1.00[AMR][1000 genomes]
rs73290384	1.00[AMR][1000 genomes]
rs73290386	1.00[AMR][1000 genomes]
rs73291971	1.00[AMR][1000 genomes]
rs73291974	1.00[AMR][1000 genomes]
rs73291978	1.00[AMR][1000 genomes]
rs73292002	1.00[AMR][1000 genomes]
rs73293944	1.00[AMR][1000 genomes]
rs73293959	1.00[AMR][1000 genomes]
rs8004222	1.00[ASN][1000 genomes]
rs8006905	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs8010985	1.00[AMR][1000 genomes]
rs8011142	1.00[AMR][1000 genomes]
rs8011336	1.00[AMR][1000 genomes]
rs8012392	1.00[AMR][1000 genomes]
rs8013270	1.00[ASN][1000 genomes]
rs8017109	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71029000-71066000	Weak transcription	Small Intestine	intestine
2	chr14:71042000-71066600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr14:71043600-71063400	Strong transcription	Primary B cells from cord blood	blood
4	chr14:71044400-71063600	Strong transcription	Primary T cells from cord blood	blood
5	chr14:71044600-71063400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
6	chr14:71045000-71063400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr14:71045000-71064200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:71045200-71063400	Strong transcription	Duodenum Smooth Muscle	Duodenum
9	chr14:71045200-71063600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr14:71045200-71063800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr14:71045200-71064400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr14:71045400-71063400	Strong transcription	Brain Anterior Caudate	brain
13	chr14:71045400-71063600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
14	chr14:71045400-71063800	Strong transcription	Monocytes-CD14+_RO01746	blood
15	chr14:71045400-71064600	Strong transcription	Primary B cells from peripheral blood	blood
16	chr14:71045600-71063800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr14:71045600-71064600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr14:71045600-71064600	Strong transcription	Primary T cells fromperipheralblood	blood
19	chr14:71045800-71063400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr14:71045800-71063400	Strong transcription	Fetal Thymus	thymus
21	chr14:71045800-71063600	Strong transcription	HUES48 Cell Line	embryonic stem cell
22	chr14:71046200-71064400	Strong transcription	Primary T helper cells fromperipheralblood	blood
23	chr14:71046400-71063400	Strong transcription	HUES6 Cell Line	embryonic stem cell
24	chr14:71046400-71063400	Strong transcription	Placenta	Placenta
25	chr14:71046400-71064800	Strong transcription	Primary T helper cells PMA-I stimulated	--
26	chr14:71046600-71063400	Strong transcription	Liver	Liver
27	chr14:71046600-71063400	Strong transcription	Fetal Lung	lung
28	chr14:71046800-71063400	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
29	chr14:71046800-71064600	Strong transcription	HUES64 Cell Line	embryonic stem cell
30	chr14:71047000-71063400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
31	chr14:71047000-71063400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr14:71047000-71063400	Strong transcription	Adipose Nuclei	Adipose
33	chr14:71047000-71063400	Strong transcription	Duodenum Mucosa	Duodenum
34	chr14:71047000-71063400	Strong transcription	HSMM	muscle
35	chr14:71047000-71064000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
36	chr14:71047200-71063400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
37	chr14:71047200-71064600	Strong transcription	Rectal Mucosa Donor 31	rectum
38	chr14:71047400-71063400	Strong transcription	Primary neutrophils fromperipheralblood	blood
39	chr14:71047400-71063400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
40	chr14:71047400-71063400	Strong transcription	Fetal Muscle Trunk	muscle
41	chr14:71047400-71063400	Strong transcription	Rectal Mucosa Donor 29	rectum
42	chr14:71047400-71063400	Strong transcription	Dnd41	blood
43	chr14:71047400-71063600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr14:71047400-71064600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
45	chr14:71047400-71064800	Strong transcription	Primary monocytes fromperipheralblood	blood
46	chr14:71047400-71066000	Weak transcription	Fetal Heart	heart
47	chr14:71047600-71063400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
48	chr14:71047600-71063800	Strong transcription	GM12878-XiMat	blood
49	chr14:71048000-71066000	Weak transcription	K562	blood
50	chr14:71048200-71063400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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