Variant report

Variant	rs11621272
Chromosome Location	chr14:70909452-70909453
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 106 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:104)

rs_ID	r²[population]
rs1044538	1.00[ASN][1000 genomes]
rs11158860	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11620719	1.00[ASN][1000 genomes]
rs11621163	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621190	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621607	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621661	1.00[ASN][1000 genomes]
rs11622793	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11622815	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11623663	1.00[ASN][1000 genomes]
rs11624147	0.91[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11624309	1.00[ASN][1000 genomes]
rs11624502	0.91[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11624706	1.00[ASN][1000 genomes]
rs11626039	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11626735	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11627167	1.00[ASN][1000 genomes]
rs11627175	1.00[ASN][1000 genomes]
rs11627938	1.00[ASN][1000 genomes]
rs11628707	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11629269	0.91[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11845636	1.00[ASN][1000 genomes]
rs11845665	1.00[ASN][1000 genomes]
rs11846101	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11846216	1.00[ASN][1000 genomes]
rs11846726	1.00[ASN][1000 genomes]
rs11849053	1.00[ASN][1000 genomes]
rs11849199	1.00[ASN][1000 genomes]
rs11849318	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11850498	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17108204	1.00[ASN][1000 genomes]
rs17108240	1.00[ASN][1000 genomes]
rs17108244	1.00[ASN][1000 genomes]
rs17108245	1.00[ASN][1000 genomes]
rs17176341	1.00[ASN][1000 genomes]
rs17765916	1.00[ASN][1000 genomes]
rs17766006	1.00[ASN][1000 genomes]
rs17766042	1.00[ASN][1000 genomes]
rs2153113	1.00[ASN][1000 genomes]
rs2233133	1.00[ASN][1000 genomes]
rs2877683	1.00[ASN][1000 genomes]
rs3859	1.00[ASN][1000 genomes]
rs45565842	1.00[ASN][1000 genomes]
rs58854929	1.00[ASN][1000 genomes]
rs61977472	1.00[ASN][1000 genomes]
rs61977473	1.00[ASN][1000 genomes]
rs61977474	1.00[ASN][1000 genomes]
rs61977478	1.00[ASN][1000 genomes]
rs61977479	1.00[ASN][1000 genomes]
rs61977501	1.00[ASN][1000 genomes]
rs61977502	1.00[ASN][1000 genomes]
rs61977508	1.00[ASN][1000 genomes]
rs61977509	1.00[ASN][1000 genomes]
rs61977511	1.00[ASN][1000 genomes]
rs61977535	1.00[ASN][1000 genomes]
rs61977538	1.00[ASN][1000 genomes]
rs61977539	1.00[ASN][1000 genomes]
rs61977540	1.00[ASN][1000 genomes]
rs61977541	1.00[ASN][1000 genomes]
rs61977544	1.00[ASN][1000 genomes]
rs61977549	1.00[ASN][1000 genomes]
rs61977550	1.00[ASN][1000 genomes]
rs61977551	1.00[ASN][1000 genomes]
rs61977553	0.91[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs61977554	0.91[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61977555	1.00[ASN][1000 genomes]
rs61979068	0.91[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979070	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979071	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979072	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979075	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979076	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979077	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979078	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979100	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979101	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979102	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979103	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979104	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979105	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979106	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979107	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979108	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61979126	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61979133	1.00[ASN][1000 genomes]
rs61979135	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979136	0.82[AFR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979137	0.82[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979139	0.82[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979141	0.82[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979504	1.00[ASN][1000 genomes]
rs61979505	1.00[ASN][1000 genomes]
rs61979511	1.00[ASN][1000 genomes]
rs61979512	1.00[ASN][1000 genomes]
rs6573970	1.00[ASN][1000 genomes]
rs7158477	1.00[ASN][1000 genomes]
rs7160692	1.00[ASN][1000 genomes]
rs74062899	1.00[ASN][1000 genomes]
rs74065307	1.00[ASN][1000 genomes]
rs74065314	1.00[ASN][1000 genomes]
rs74065331	1.00[ASN][1000 genomes]
rs8004222	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8013270	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8017109	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	esv3431215	chr14:70903367-70909828	ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70908400-70915800	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr14:70908800-70909800	ZNF genes & repeats	Left Ventricle	heart
3	chr14:70908800-70910800	ZNF genes & repeats	Adipose Nuclei	Adipose
4	chr14:70908800-70921600	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr14:70909000-70910400	ZNF genes & repeats	Aorta	Aorta
6	chr14:70909200-70910800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast

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