The 2.0 version of rSNPBase

Variant report

Variant rs17108204
Chromosome Location chr14:70989175-70989176
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:70958800-70993800 Weak transcription Primary T helper naive cells fromperipheralblood blood
2 chr14:70968600-70989400 Weak transcription Pancreas Pancrea
3 chr14:70975800-70990000 Weak transcription Rectal Smooth Muscle rectum
4 chr14:70980000-70989400 Weak transcription Brain Angular Gyrus brain
5 chr14:70981000-70989400 Weak transcription Brain Substantia Nigra brain
6 chr14:70981000-70989600 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr14:70981200-70994400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr14:70982000-71003600 Weak transcription HSMM muscle
9 chr14:70982400-71003200 Weak transcription Psoas Muscle Psoas
10 chr14:70982800-70989400 Weak transcription Stomach Smooth Muscle stomach
11 chr14:70983800-70989400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr14:70985800-70989400 Weak transcription Left Ventricle heart
13 chr14:70985800-71003800 Weak transcription HSMMtube muscle
14 chr14:70986000-70991800 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr14:70987000-70989800 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr14:70987200-70989400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr14:70987600-70990200 Weak transcription Brain Inferior Temporal Lobe brain
18 chr14:70987600-70993200 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr14:70987800-70989400 Weak transcription Adipose Nuclei Adipose
20 chr14:70987800-70989400 Weak transcription Liver Liver
21 chr14:70987800-70989400 Weak transcription Brain Anterior Caudate brain
22 chr14:70987800-70989400 Weak transcription Gastric stomach
23 chr14:70987800-70990800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr14:70987800-70995800 Weak transcription Colon Smooth Muscle Colon
25 chr14:70987800-71005800 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr14:70988000-70989400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr14:70988000-70989400 Weak transcription Primary T cells fromperipheralblood blood
28 chr14:70988000-70989400 Weak transcription Brain Cingulate Gyrus brain
29 chr14:70988000-70989600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr14:70988000-70989800 Weak transcription Primary B cells from peripheral blood blood
31 chr14:70988000-70990600 Weak transcription Placenta Amnion Placenta Amnion
32 chr14:70988000-70991000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr14:70988000-70991000 Weak transcription Brain Hippocampus Middle brain
34 chr14:70988000-70991000 Weak transcription Spleen Spleen
35 chr14:70988000-71028200 Weak transcription Esophagus oesophagus
36 chr14:70988000-71029800 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr14:70988200-70989600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr14:70988200-70989800 Weak transcription Right Ventricle heart
39 chr14:70988200-70990200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr14:70988200-70990800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr14:70988200-70991400 Strong transcription Primary T cells from cord blood blood
42 chr14:70988400-70994600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr14:70988400-71003800 Weak transcription Primary B cells from cord blood blood
44 chr14:70988600-70989400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr14:70988600-70989800 ZNF genes & repeats Aorta Aorta
46 chr14:70988600-70990200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr14:70988600-70991600 ZNF genes & repeats Ovary ovary
48 chr14:70988600-70993000 Weak transcription Brain Germinal Matrix brain
49 chr14:70988600-70993200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr14:70988600-70997000 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015