Variant report

Variant	rs61979103
Chromosome Location	chr14:70915889-70915890
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 104 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:103)

rs_ID	r²[population]
rs1044538	1.00[ASN][1000 genomes]
rs11158860	1.00[ASN][1000 genomes]
rs11620719	1.00[ASN][1000 genomes]
rs11621163	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621190	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621272	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621607	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621661	1.00[ASN][1000 genomes]
rs11622793	1.00[ASN][1000 genomes]
rs11622815	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11623663	1.00[ASN][1000 genomes]
rs11624147	1.00[ASN][1000 genomes]
rs11624309	1.00[ASN][1000 genomes]
rs11624502	1.00[ASN][1000 genomes]
rs11624706	1.00[ASN][1000 genomes]
rs11626039	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11626735	1.00[ASN][1000 genomes]
rs11627167	1.00[ASN][1000 genomes]
rs11627175	1.00[ASN][1000 genomes]
rs11627938	1.00[ASN][1000 genomes]
rs11628707	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11629269	1.00[ASN][1000 genomes]
rs11845636	1.00[ASN][1000 genomes]
rs11845665	1.00[ASN][1000 genomes]
rs11846101	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11846216	1.00[ASN][1000 genomes]
rs11846726	1.00[ASN][1000 genomes]
rs11849053	1.00[ASN][1000 genomes]
rs11849199	1.00[ASN][1000 genomes]
rs11849318	1.00[ASN][1000 genomes]
rs11850498	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17108204	1.00[ASN][1000 genomes]
rs17108240	1.00[ASN][1000 genomes]
rs17108244	1.00[ASN][1000 genomes]
rs17108245	1.00[ASN][1000 genomes]
rs17176341	1.00[ASN][1000 genomes]
rs17765916	1.00[ASN][1000 genomes]
rs17766006	1.00[ASN][1000 genomes]
rs17766042	1.00[ASN][1000 genomes]
rs2153113	1.00[ASN][1000 genomes]
rs2233133	1.00[ASN][1000 genomes]
rs2877683	1.00[ASN][1000 genomes]
rs3859	1.00[ASN][1000 genomes]
rs45565842	1.00[ASN][1000 genomes]
rs58854929	1.00[ASN][1000 genomes]
rs61977472	1.00[ASN][1000 genomes]
rs61977473	1.00[ASN][1000 genomes]
rs61977474	1.00[ASN][1000 genomes]
rs61977478	1.00[ASN][1000 genomes]
rs61977479	1.00[ASN][1000 genomes]
rs61977501	1.00[ASN][1000 genomes]
rs61977502	1.00[ASN][1000 genomes]
rs61977508	1.00[ASN][1000 genomes]
rs61977509	1.00[ASN][1000 genomes]
rs61977511	1.00[ASN][1000 genomes]
rs61977535	1.00[ASN][1000 genomes]
rs61977538	1.00[ASN][1000 genomes]
rs61977539	1.00[ASN][1000 genomes]
rs61977540	1.00[ASN][1000 genomes]
rs61977541	1.00[ASN][1000 genomes]
rs61977544	1.00[ASN][1000 genomes]
rs61977549	1.00[ASN][1000 genomes]
rs61977550	1.00[ASN][1000 genomes]
rs61977551	1.00[ASN][1000 genomes]
rs61977554	1.00[ASN][1000 genomes]
rs61977555	1.00[ASN][1000 genomes]
rs61979068	1.00[ASN][1000 genomes]
rs61979070	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979071	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979072	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979075	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979076	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979077	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979078	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979100	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979101	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979102	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979104	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979105	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979106	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979107	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979108	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61979126	0.95[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61979133	1.00[ASN][1000 genomes]
rs61979135	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979136	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979137	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979139	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979141	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979504	1.00[ASN][1000 genomes]
rs61979505	1.00[ASN][1000 genomes]
rs61979511	1.00[ASN][1000 genomes]
rs61979512	1.00[ASN][1000 genomes]
rs6573970	1.00[ASN][1000 genomes]
rs7158477	1.00[ASN][1000 genomes]
rs7160692	1.00[ASN][1000 genomes]
rs74062899	1.00[ASN][1000 genomes]
rs74065307	1.00[ASN][1000 genomes]
rs74065314	1.00[ASN][1000 genomes]
rs74065331	1.00[ASN][1000 genomes]
rs8004222	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8013270	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8017109	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70908800-70921600	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr14:70910600-70955600	Weak transcription	Left Ventricle	heart
3	chr14:70913200-70921600	Weak transcription	Adipose Nuclei	Adipose
4	chr14:70913800-70921400	Weak transcription	Ovary	ovary
5	chr14:70914400-70918000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr14:70915000-70916400	Enhancers	HepG2	liver
7	chr14:70915400-70916000	Enhancers	Small Intestine	intestine
8	chr14:70915400-70916600	Enhancers	Psoas Muscle	Psoas
9	chr14:70915600-70919800	Weak transcription	Fetal Heart	heart
10	chr14:70915800-70916400	Weak transcription	Liver	Liver

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