Variant report

Variant	rs7160692
Chromosome Location	chr14:71074465-71074466
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFF	chr14:71074122-71074475	HepG2	liver:	n/a	chr14:71074294-71074312
2	CTCF	chr14:71074360-71074510	HEK293	kidney:	n/a	n/a
3	MAFK	chr14:71074182-71074472	IMR90	lung:	n/a	chr14:71074295-71074310 chr14:71074300-71074311 chr14:71074299-71074310 chr14:71074300-71074311 chr14:71074295-71074311

Variant related genes	Relation type
RN7SL77P	TF binding region

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs11158860	1.00[ASN][1000 genomes]
rs11620719	1.00[ASN][1000 genomes]
rs11621163	1.00[ASN][1000 genomes]
rs11621190	1.00[ASN][1000 genomes]
rs11621272	1.00[ASN][1000 genomes]
rs11621607	1.00[ASN][1000 genomes]
rs11622815	1.00[ASN][1000 genomes]
rs11626039	1.00[ASN][1000 genomes]
rs11628707	1.00[ASN][1000 genomes]
rs11846101	1.00[ASN][1000 genomes]
rs11850498	1.00[ASN][1000 genomes]
rs17108204	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17108240	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs17108244	1.00[ASN][1000 genomes]
rs17108245	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs17176341	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17765916	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17766006	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17766042	1.00[ASN][1000 genomes]
rs2153113	1.00[CEU][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2233133	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2877683	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61979068	1.00[ASN][1000 genomes]
rs61979070	1.00[ASN][1000 genomes]
rs61979071	1.00[ASN][1000 genomes]
rs61979072	1.00[ASN][1000 genomes]
rs61979075	1.00[ASN][1000 genomes]
rs61979076	1.00[ASN][1000 genomes]
rs61979077	1.00[ASN][1000 genomes]
rs61979078	1.00[ASN][1000 genomes]
rs61979100	1.00[ASN][1000 genomes]
rs61979101	1.00[ASN][1000 genomes]
rs61979102	1.00[ASN][1000 genomes]
rs61979103	1.00[ASN][1000 genomes]
rs61979104	1.00[ASN][1000 genomes]
rs61979105	1.00[ASN][1000 genomes]
rs61979106	1.00[ASN][1000 genomes]
rs61979107	1.00[ASN][1000 genomes]
rs61979126	1.00[ASN][1000 genomes]
rs61979133	1.00[ASN][1000 genomes]
rs61979135	1.00[ASN][1000 genomes]
rs61979136	1.00[ASN][1000 genomes]
rs61979137	1.00[ASN][1000 genomes]
rs61979139	1.00[ASN][1000 genomes]
rs61979141	1.00[ASN][1000 genomes]
rs6573970	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7158477	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8004222	1.00[ASN][1000 genomes]
rs8013270	1.00[ASN][1000 genomes]
rs8017109	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71068400-71078600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:71069800-71076800	Weak transcription	GM12878-XiMat	blood

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