Variant report

Variant	rs7149619
Chromosome Location	chr14:68844585-68844586
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:68839948..68842055-chr14:68844186..68845983,2	MCF-7	breast:
2	chr14:68842793..68845023-chr14:69283063..69285593,2	K562	blood:
3	chr14:68833551..68835141-chr14:68843707..68845855,2	K562	blood:
4	chr14:68841263..68843280-chr14:68843376..68844919,2	MCF-7	breast:
5	chr14:68843051..68845983-chr14:68924155..68927430,4	MCF-7	breast:
6	chr14:68843357..68844886-chr14:68924790..68926556,2	MCF-7	breast:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs17105494	0.85[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs17105501	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17105545	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7359118	1.00[CHB][hapmap]
rs749350	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs749352	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68832000-68851600	Weak transcription	Lung	lung
2	chr14:68833000-68845200	Enhancers	Primary B cells from peripheral blood	blood
3	chr14:68834400-68846400	Weak transcription	Fetal Heart	heart
4	chr14:68836400-68847000	Weak transcription	Aorta	Aorta
5	chr14:68839800-68850600	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr14:68840000-68845800	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr14:68840600-68847600	Enhancers	Primary T helper cells PMA-I stimulated	--
8	chr14:68840600-68847800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr14:68840800-68844600	Enhancers	Fetal Muscle Leg	muscle
10	chr14:68840800-68845200	Enhancers	Skeletal Muscle Female	skeletal muscle
11	chr14:68840800-68847400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
12	chr14:68840800-68847400	Enhancers	Primary T helper cells fromperipheralblood	blood
13	chr14:68840800-68847600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
14	chr14:68840800-68847600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
15	chr14:68841000-68844600	Enhancers	Fetal Thymus	thymus
16	chr14:68841000-68846000	Enhancers	Fetal Lung	lung
17	chr14:68841200-68845800	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr14:68841400-68844600	Enhancers	Primary T cells fromperipheralblood	blood
19	chr14:68841400-68845200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr14:68841400-68845200	Enhancers	Rectal Smooth Muscle	rectum
21	chr14:68841400-68847200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
22	chr14:68841600-68845400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr14:68842000-68844600	Enhancers	Thymus	Thymus
24	chr14:68842000-68845200	Enhancers	Primary T killer memory cells from peripheral blood	blood
25	chr14:68842000-68845200	Enhancers	Skeletal Muscle Male	skeletal muscle
26	chr14:68842000-68845800	Enhancers	Primary T helper naive cells from peripheral blood	blood
27	chr14:68842200-68845200	Enhancers	Breast Myoepithelial Primary Cells	Breast
28	chr14:68842400-68845000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr14:68842400-68846400	Enhancers	Colon Smooth Muscle	Colon
30	chr14:68842400-68850400	Weak transcription	Pancreas	Pancrea
31	chr14:68842600-68845000	Enhancers	Primary hematopoietic stem cells	blood
32	chr14:68842600-68845200	Enhancers	Fetal Stomach	stomach
33	chr14:68842800-68844600	Enhancers	Rectal Mucosa Donor 29	rectum
34	chr14:68842800-68845200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr14:68842800-68845200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr14:68843000-68844600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr14:68843000-68844600	Enhancers	HMEC	breast
38	chr14:68843000-68844600	Enhancers	NHEK	skin
39	chr14:68843000-68845000	Enhancers	HepG2	liver
40	chr14:68843000-68845200	Enhancers	Brain Substantia Nigra	brain
41	chr14:68843000-68845200	Enhancers	Osteobl	bone
42	chr14:68843200-68844600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr14:68843200-68844600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
44	chr14:68843200-68844600	Enhancers	Muscle Satellite Cultured Cells	--
45	chr14:68843200-68844600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr14:68843200-68844600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr14:68843200-68844600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
48	chr14:68843200-68844600	Enhancers	Placenta	Placenta
49	chr14:68843200-68844600	Enhancers	Left Ventricle	heart
50	chr14:68843200-68844600	Enhancers	Sigmoid Colon	Sigmoid Colon

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