Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10133686	0.86[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10483292	0.85[JPT][hapmap]
rs1062230	0.90[CEU][hapmap]
rs17109491	0.82[JPT][hapmap]
rs17109498	0.85[JPT][hapmap]
rs17109509	0.85[JPT][hapmap]
rs17109521	0.85[JPT][hapmap]
rs17109529	0.85[JPT][hapmap]
rs17109537	0.92[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs1952501	0.85[JPT][hapmap]
rs2003997	0.91[ASN][1000 genomes]
rs2225269	0.94[ASN][1000 genomes]
rs2225270	0.85[JPT][hapmap]
rs4522329	0.85[ASN][1000 genomes]
rs6574173	0.89[AFR][1000 genomes]
rs7147345	0.86[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7149439	0.85[JPT][hapmap]
rs7153942	0.85[JPT][hapmap]
rs8004569	0.85[JPT][hapmap]
rs8007508	0.91[AFR][1000 genomes]
rs8017234	0.85[JPT][hapmap]
rs8018041	0.85[JPT][hapmap]
rs873103	0.92[ASN][1000 genomes]
rs913684	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901504	chr14:25184210-25646203	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv901509	chr14:25398571-25743484	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv901511	chr14:25505085-25588029	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv15004	chr14:25536352-25537322	Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:25535000-25536800	Enhancers	Brain Germinal Matrix	brain

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