Variant report

Variant	rs71539015
Chromosome Location	chr6:100703493-100703494
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11752981	0.91[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs11759084	0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13196553	1.00[AFR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13196561	0.88[EUR][1000 genomes]
rs13199764	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13203561	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13213230	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13217178	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34260097	1.00[AFR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35536355	1.00[AFR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6916312	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:100695200-100705600	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr6:100702400-100708800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr6:100702600-100703600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr6:100703400-100704000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr6:100703400-100704000	Enhancers	NHEK	skin
6	chr6:100703400-100704400	Enhancers	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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