Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:71076190..71078982-chr14:71275139..71277878,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MED6-1	chr14:71075515-71078067	ENSG00000245466

Variant related genes	Relation type
ENSG00000006432	Chromatin interaction
ENSG00000259153	Chromatin interaction

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10130378	0.82[ASN][1000 genomes]
rs10137252	0.86[ASN][1000 genomes]
rs10137299	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10137634	0.82[ASW][hapmap];0.90[JPT][hapmap];0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10138448	0.95[ASN][1000 genomes]
rs10138568	0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10141276	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10141338	0.95[ASN][1000 genomes]
rs10141894	0.95[ASN][1000 genomes]
rs10144489	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10146381	0.95[ASN][1000 genomes]
rs10148450	0.86[ASN][1000 genomes]
rs10162314	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs11844731	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs12100977	0.86[ASN][1000 genomes]
rs28418834	0.95[ASN][1000 genomes]
rs28529160	0.95[ASN][1000 genomes]
rs28668735	0.86[ASN][1000 genomes]
rs28676781	0.86[ASN][1000 genomes]
rs28688661	0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs28797925	0.95[ASN][1000 genomes]
rs3784071	1.00[CHB][hapmap];0.89[JPT][hapmap];0.95[ASN][1000 genomes]
rs7154745	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7158210	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs73283952	0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs8015825	1.00[CEU][hapmap]
rs9323540	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71068400-71078600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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