Variant report

Variant	rs7159161
Chromosome Location	chr14:71901238-71901239
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:71899659..71902752-chr14:71906518..71909457,3	MCF-7	breast:
2	chr14:71881830..71883799-chr14:71900386..71901976,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10141864	0.81[AFR][1000 genomes]
rs10141975	0.81[AFR][1000 genomes]
rs61419469	0.95[AFR][1000 genomes]
rs61586684	0.82[AFR][1000 genomes]
rs7151209	0.82[AFR][1000 genomes]
rs73302913	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498021	chr14:71874708-72128721	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3388109	chr14:71888248-71908062	Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71869600-71904200	Weak transcription	Hela-S3	cervix
2	chr14:71878600-71905200	Weak transcription	Aorta	Aorta
3	chr14:71882400-71904400	Weak transcription	NH-A	brain
4	chr14:71883800-71905800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr14:71885800-71915400	Weak transcription	Pancreas	Pancrea
6	chr14:71889600-71902000	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr14:71889800-71905000	Weak transcription	HSMM	muscle
8	chr14:71892200-71905400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr14:71892600-71905400	Weak transcription	NHEK	skin
10	chr14:71892800-71907600	Weak transcription	Dnd41	blood
11	chr14:71893000-71904200	Weak transcription	Osteobl	bone
12	chr14:71893800-71902400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr14:71894200-71904400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr14:71895600-71905200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr14:71896800-71904200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr14:71896800-71905000	Weak transcription	HSMMtube	muscle
17	chr14:71897200-71904200	Weak transcription	NHLF	lung
18	chr14:71897600-71902600	Weak transcription	Primary T helper cells fromperipheralblood	blood
19	chr14:71897600-71904200	Weak transcription	H9 Cell Line	embryonic stem cell
20	chr14:71897600-71904200	Weak transcription	Brain Anterior Caudate	brain
21	chr14:71897600-71905400	Weak transcription	Small Intestine	intestine
22	chr14:71898000-71904200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
23	chr14:71898000-71909400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
24	chr14:71898200-71904200	Weak transcription	Primary T helper cells PMA-I stimulated	--
25	chr14:71898200-71904600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
26	chr14:71898200-71904800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
27	chr14:71898400-71904800	Weak transcription	H1 Cell Line	embryonic stem cell
28	chr14:71898600-71904000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr14:71898600-71904200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
30	chr14:71898800-71904400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr14:71899400-71905000	Weak transcription	Fetal Intestine Large	intestine
32	chr14:71899600-71904600	Weak transcription	Fetal Stomach	stomach
33	chr14:71899800-71904800	Weak transcription	Primary B cells from peripheral blood	blood
34	chr14:71899800-71905200	Weak transcription	Fetal Heart	heart
35	chr14:71900000-71927200	Weak transcription	Primary B cells from cord blood	blood
36	chr14:71900200-71904200	Weak transcription	Primary T cells from cord blood	blood
37	chr14:71900200-71904400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
38	chr14:71900200-71909000	Weak transcription	Fetal Intestine Small	intestine
39	chr14:71900200-71915800	Weak transcription	Sigmoid Colon	Sigmoid Colon
40	chr14:71900400-71915400	Weak transcription	Gastric	stomach
41	chr14:71900600-71902600	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr14:71900600-71904600	Weak transcription	HUES48 Cell Line	embryonic stem cell
43	chr14:71900800-71904400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
44	chr14:71901000-71904600	Weak transcription	Brain Cingulate Gyrus	brain
45	chr14:71901200-71901400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr14:71901200-71901400	ZNF genes & repeats	GM12878-XiMat	blood
47	chr14:71901200-71901800	Strong transcription	Cortex derived primary cultured neurospheres	brain
48	chr14:71901200-71901800	Strong transcription	Monocytes-CD14+_RO01746	blood
49	chr14:71901200-71904600	Weak transcription	Pancreatic Islets	Pancreatic Islet

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