Variant report

Variant	rs7151209
Chromosome Location	chr14:71785891-71785892
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:71780085..71783168-chr14:71784973..71787067,3	K562	blood:
2	chr14:71776798..71778756-chr14:71785140..71789113,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000259146	Chromatin interaction

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10129431	0.90[AFR][1000 genomes]
rs10141864	0.89[AFR][1000 genomes]
rs10141975	0.89[AFR][1000 genomes]
rs61419469	0.81[AFR][1000 genomes]
rs61586684	1.00[AFR][1000 genomes]
rs7144439	0.86[AFR][1000 genomes]
rs7159161	0.82[AFR][1000 genomes]
rs718853	0.91[LWK][hapmap];0.97[MKK][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs73302913	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832827	chr14:71676178-71833519	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71771800-71786400	Weak transcription	Pancreas	Pancrea
2	chr14:71772800-71786200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr14:71779800-71786400	Weak transcription	Primary hematopoietic stem cells	blood
4	chr14:71781800-71786400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr14:71781800-71786400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr14:71782000-71786200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr14:71782200-71786200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr14:71784400-71786200	Weak transcription	NHDF-Ad	bronchial
9	chr14:71784400-71786400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr14:71784400-71786400	Weak transcription	Fetal Muscle Leg	muscle
11	chr14:71784600-71786400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr14:71784600-71786400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr14:71784600-71786400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr14:71784600-71786400	Weak transcription	Left Ventricle	heart
15	chr14:71784600-71786400	Weak transcription	Spleen	Spleen
16	chr14:71784800-71786200	Enhancers	Cortex derived primary cultured neurospheres	brain
17	chr14:71785000-71786200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr14:71785000-71786200	Weak transcription	Liver	Liver
19	chr14:71785000-71786400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr14:71785800-71786000	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr14:71785800-71786200	Enhancers	Fetal Heart	heart
22	chr14:71785800-71786200	Enhancers	Hela-S3	cervix

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