Variant report

Variant	rs7195995
Chromosome Location	chr16:69844027-69844028
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs13333561	1.00[GIH][hapmap]
rs13335267	1.00[GIH][hapmap]
rs28563078	1.00[EUR][1000 genomes]
rs6499256	0.96[AFR][1000 genomes]
rs7190665	1.00[GIH][hapmap]
rs74029466	0.86[AFR][1000 genomes]
rs8047010	0.80[YRI][hapmap]
rs8059162	0.80[YRI][hapmap]
rs8059816	1.00[EUR][1000 genomes]
rs8062334	0.88[AFR][1000 genomes]
rs8062543	0.80[YRI][hapmap]
rs8062596	0.95[YRI][hapmap];0.96[AFR][1000 genomes]
rs8063027	1.00[ASW][hapmap];0.96[AFR][1000 genomes]
rs9934983	1.00[GIH][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv906823	chr16:69711533-69959223	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:69797600-69853400	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr16:69807200-69852400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr16:69807200-69852800	Weak transcription	Hela-S3	cervix
4	chr16:69807200-69854800	Weak transcription	Psoas Muscle	Psoas
5	chr16:69817800-69854600	Weak transcription	HMEC	breast
6	chr16:69820200-69845000	Weak transcription	K562	blood
7	chr16:69822400-69854800	Weak transcription	Stomach Mucosa	stomach
8	chr16:69823800-69874800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr16:69824200-69852400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr16:69830200-69856600	Strong transcription	Monocytes-CD14+_RO01746	blood
11	chr16:69830600-69857600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr16:69830600-69864200	Weak transcription	Colon Smooth Muscle	Colon
13	chr16:69830600-69867000	Weak transcription	Right Ventricle	heart
14	chr16:69831000-69845000	Weak transcription	Fetal Brain Male	brain
15	chr16:69831000-69845600	Weak transcription	A549	lung
16	chr16:69831000-69852400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr16:69831000-69852400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
18	chr16:69831000-69854800	Weak transcription	Aorta	Aorta
19	chr16:69831000-69856400	Strong transcription	Primary monocytes fromperipheralblood	blood
20	chr16:69831200-69846200	Strong transcription	Fetal Intestine Small	intestine
21	chr16:69832400-69858400	Strong transcription	Primary neutrophils fromperipheralblood	blood
22	chr16:69833200-69854800	Weak transcription	NH-A	brain
23	chr16:69833400-69852400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr16:69833400-69854600	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr16:69833400-69854600	Weak transcription	NHLF	lung
26	chr16:69833600-69845600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr16:69833600-69847800	Weak transcription	HUES64 Cell Line	embryonic stem cell
28	chr16:69833800-69847800	Weak transcription	Adipose Nuclei	Adipose
29	chr16:69833800-69854400	Weak transcription	Osteobl	bone
30	chr16:69833800-69854600	Weak transcription	Skeletal Muscle Female	skeletal muscle
31	chr16:69833800-69854800	Weak transcription	HSMM	muscle
32	chr16:69833800-69854800	Weak transcription	HSMMtube	muscle
33	chr16:69833800-69857600	Weak transcription	Small Intestine	intestine
34	chr16:69833800-69864400	Weak transcription	Rectal Smooth Muscle	rectum
35	chr16:69833800-69874600	Weak transcription	Dnd41	blood
36	chr16:69833800-69875600	Weak transcription	NHEK	skin
37	chr16:69834000-69847600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr16:69834000-69850400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr16:69834000-69852400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
40	chr16:69834000-69852400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
41	chr16:69834000-69852400	Weak transcription	Fetal Brain Female	brain
42	chr16:69834000-69854400	Weak transcription	Fetal Kidney	kidney
43	chr16:69834000-69855000	Weak transcription	Brain Germinal Matrix	brain
44	chr16:69834000-69910600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
45	chr16:69834200-69846000	Weak transcription	Fetal Muscle Leg	muscle
46	chr16:69834200-69851600	Weak transcription	HUES6 Cell Line	embryonic stem cell
47	chr16:69834200-69851600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr16:69834200-69852400	Weak transcription	H9 Cell Line	embryonic stem cell
49	chr16:69834200-69857800	Weak transcription	Left Ventricle	heart
50	chr16:69834200-69892200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood

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