The 2.0 version of rSNPBase

Variant report

Variant rs7248054
Chromosome Location chr19:44655537-44655538
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44646800-44656600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr19:44646800-44657800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr19:44646800-44660200 Weak transcription Stomach Mucosa stomach
4 chr19:44647000-44655600 Weak transcription HUVEC blood vessel
5 chr19:44647000-44660200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr19:44647000-44660200 Weak transcription Hela-S3 cervix
7 chr19:44647000-44660400 Weak transcription Fetal Heart heart
8 chr19:44647600-44655800 Weak transcription Fetal Brain Male brain
9 chr19:44647800-44668400 ZNF genes & repeats Liver Liver
10 chr19:44648200-44656400 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr19:44648200-44657600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr19:44648200-44658200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr19:44648200-44660000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr19:44648400-44656000 Strong transcription Primary T helper cells fromperipheralblood blood
15 chr19:44648400-44656000 Strong transcription Rectal Mucosa Donor 29 rectum
16 chr19:44648400-44656000 Strong transcription Skeletal Muscle Male skeletal muscle
17 chr19:44648400-44656400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr19:44648400-44657200 Strong transcription Brain Germinal Matrix brain
19 chr19:44648400-44658000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
20 chr19:44648400-44658800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr19:44648400-44658800 Strong transcription Fetal Muscle Leg muscle
22 chr19:44648400-44659400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr19:44648400-44660000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr19:44648400-44660000 Strong transcription Placenta Placenta
25 chr19:44648400-44660400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr19:44648400-44663200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
27 chr19:44648600-44655800 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr19:44648600-44656200 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr19:44648600-44656600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr19:44648600-44656800 Strong transcription Brain Substantia Nigra brain
31 chr19:44648600-44657200 Strong transcription Thymus Thymus
32 chr19:44648600-44658600 Strong transcription Brain Anterior Caudate brain
33 chr19:44648600-44658600 Strong transcription Rectal Smooth Muscle rectum
34 chr19:44648600-44658800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr19:44648600-44659000 Strong transcription HUES64 Cell Line embryonic stem cell
36 chr19:44648600-44659000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr19:44648600-44659000 Strong transcription Dnd41 blood
38 chr19:44648600-44659400 Strong transcription Fetal Muscle Trunk muscle
39 chr19:44648600-44659600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr19:44648600-44659800 Strong transcription Cortex derived primary cultured neurospheres brain
41 chr19:44648600-44660000 Strong transcription Left Ventricle heart
42 chr19:44648600-44660200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr19:44648600-44660200 Strong transcription Muscle Satellite Cultured Cells --
44 chr19:44648600-44661800 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr19:44648800-44658000 Strong transcription Primary T cells fromperipheralblood blood
46 chr19:44648800-44661200 Strong transcription Fetal Intestine Large intestine
47 chr19:44649000-44657000 Strong transcription Fetal Brain Female brain
48 chr19:44649400-44656200 Weak transcription HMEC breast
49 chr19:44649400-44657800 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr19:44649600-44657000 Strong transcription Fetal Stomach stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015