Variant report

Variant	rs72618851
Chromosome Location	chr4:130727377-130727378
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11931514	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11940610	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12648472	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2391539	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28698400	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28727307	1.00[EUR][1000 genomes]
rs4512011	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs59382846	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs60882021	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72615856	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72615857	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72615858	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72615859	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72615861	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72615864	0.84[EUR][1000 genomes]
rs72615865	0.84[EUR][1000 genomes]
rs72618852	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72618853	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7685810	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428770	chr4:130692631-130863832	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:130726200-130727400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr4:130726200-130728000	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr4:130726200-130728200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr4:130726400-130728200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr4:130727000-130728200	Weak transcription	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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