Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11931514	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11940610	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12648472	0.84[EUR][1000 genomes]
rs2391539	0.84[EUR][1000 genomes]
rs28698400	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28727307	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4512011	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs57633949	0.89[ASN][1000 genomes]
rs59382846	0.81[ASN][1000 genomes]
rs60074415	0.89[ASN][1000 genomes]
rs60882021	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72615856	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72615857	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72615858	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72615859	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72615861	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72615864	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72615865	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72615878	0.83[ASN][1000 genomes]
rs72618851	0.84[EUR][1000 genomes]
rs72618852	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72618853	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428770	chr4:130692631-130863832	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1023482	chr4:130737503-130783577	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1019516	chr4:130754819-130976202	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:130781800-130782800	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr4:130782600-130784600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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