Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11931514	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11939476	0.81[AFR][1000 genomes]
rs11940610	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12648472	1.00[EUR][1000 genomes]
rs2391539	1.00[EUR][1000 genomes]
rs28698400	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4512011	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs57633949	0.83[ASN][1000 genomes]
rs59382846	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60074415	0.83[ASN][1000 genomes]
rs60882021	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72615856	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72615857	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72615858	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72615859	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72615861	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72615864	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72615865	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618851	1.00[EUR][1000 genomes]
rs72618852	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72618853	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7685810	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428770	chr4:130692631-130863832	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1023482	chr4:130737503-130783577	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv523994	chr4:130738623-130774012	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
4	nsv1019516	chr4:130754819-130976202	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:130773000-130773800	Enhancers	Hela-S3	cervix
2	chr4:130773200-130774000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:130773400-130775200	Enhancers	HepG2	liver
4	chr4:130773600-130774000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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