Variant report

Variant	rs72646180
Chromosome Location	chr1:91080884-91080885
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12563762	0.92[ASN][1000 genomes]
rs12563942	0.90[ASN][1000 genomes]
rs12566312	0.92[ASN][1000 genomes]
rs12568782	0.83[ASN][1000 genomes]
rs17131070	0.82[ASN][1000 genomes]
rs17131079	0.92[ASN][1000 genomes]
rs17131080	0.92[ASN][1000 genomes]
rs1819590	0.83[ASN][1000 genomes]
rs2225835	0.92[ASN][1000 genomes]
rs56813953	0.90[ASN][1000 genomes]
rs72646169	0.83[ASN][1000 genomes]
rs72646170	0.83[ASN][1000 genomes]
rs72646171	0.90[ASN][1000 genomes]
rs72646172	0.92[ASN][1000 genomes]
rs72646173	0.92[ASN][1000 genomes]
rs72646175	0.92[ASN][1000 genomes]
rs72646176	0.92[ASN][1000 genomes]
rs72646177	0.92[ASN][1000 genomes]
rs948833	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870816	chr1:91018205-91141196	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:91080400-91081200	Enhancers	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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