Variant report

Variant	rs72659133
Chromosome Location	chr8:58652144-58652145
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs55682750	0.92[EUR][1000 genomes]
rs56147716	0.93[EUR][1000 genomes]
rs56259251	0.83[EUR][1000 genomes]
rs6986591	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6991360	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72657185	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72657186	0.83[EUR][1000 genomes]
rs72657189	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72657202	1.00[ASN][1000 genomes]
rs72659115	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72659116	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72659120	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72659121	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72659122	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72659130	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72659131	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72659132	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72659134	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72659138	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7816521	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7825239	0.90[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533217	chr8:57991065-58789001	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv890937	chr8:58600994-58695807	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58651200-58654000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:58651600-58653800	Weak transcription	Ovary	ovary
3	chr8:58651800-58658600	Weak transcription	Gastric	stomach
4	chr8:58651800-58660400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:58652000-58653200	Weak transcription	Duodenum Smooth Muscle	Duodenum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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