Variant report

Variant	rs72682178
Chromosome Location	chr4:125690074-125690075
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1506553	0.91[EUR][1000 genomes]
rs1506554	0.91[EUR][1000 genomes]
rs72680301	0.81[EUR][1000 genomes]
rs72682183	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72682188	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72682190	1.00[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs72682201	1.00[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs72683808	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs72683810	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs72683817	1.00[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs72683823	1.00[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs72683854	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs72683856	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs72683857	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs72683861	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs72683864	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs72683878	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs72683881	0.88[EUR][1000 genomes]
rs72683885	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs72683888	0.88[EUR][1000 genomes]
rs72683891	0.88[EUR][1000 genomes]
rs72683895	0.88[EUR][1000 genomes]
rs72683897	1.00[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs72683899	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879882	chr4:125662969-125703938	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125689800-125692000	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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