Variant report

Variant	rs72707063
Chromosome Location	chr15:35493041-35493042
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12324560	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7165876	1.00[ASN][1000 genomes]
rs7174153	1.00[ASN][1000 genomes]
rs72705033	1.00[ASN][1000 genomes]
rs72705035	1.00[ASN][1000 genomes]
rs72705094	1.00[ASN][1000 genomes]
rs72705099	1.00[ASN][1000 genomes]
rs72707010	1.00[ASN][1000 genomes]
rs72707025	1.00[ASN][1000 genomes]
rs72707037	1.00[ASN][1000 genomes]
rs72707049	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72707050	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72707054	1.00[AMR][1000 genomes]
rs72707055	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72707056	0.81[AMR][1000 genomes]
rs72707059	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72707060	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72707062	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72707066	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72707067	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72707071	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72707072	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs8028485	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3350109	chr15:34668106-35534229	Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
2	nsv904073	chr15:35467096-35686267	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:35484200-35502000	Weak transcription	Left Ventricle	heart
2	chr15:35489000-35504600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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