The 2.0 version of rSNPBase

Variant report

Variant rs72727706
Chromosome Location chr1:185530982-185530983
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185521000-185533800 Weak transcription Placenta Placenta
2 chr1:185525400-185536000 Weak transcription Stomach Mucosa stomach
3 chr1:185526400-185533800 Weak transcription Osteobl bone
4 chr1:185527800-185532400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
5 chr1:185528000-185536000 Weak transcription Fetal Kidney kidney
6 chr1:185528200-185531800 Enhancers Primary T regulatory cells fromperipheralblood blood
7 chr1:185528400-185531000 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr1:185528400-185531200 Enhancers Primary hematopoietic stem cells blood
9 chr1:185528400-185531800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr1:185528400-185532400 Enhancers Primary T helper cells fromperipheralblood blood
11 chr1:185528600-185531000 Enhancers Primary monocytes fromperipheralblood blood
12 chr1:185528600-185531200 Enhancers Primary T cells fromperipheralblood blood
13 chr1:185528600-185531400 Enhancers Primary hematopoietic stem cells short term culture blood
14 chr1:185528600-185533000 Enhancers Primary T cells from cord blood blood
15 chr1:185528600-185539800 Enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr1:185528800-185531000 Enhancers Primary B cells from peripheral blood blood
17 chr1:185528800-185531200 Enhancers Primary mononuclear cells fromperipheralblood Blood
18 chr1:185528800-185531600 Enhancers Fetal Thymus thymus
19 chr1:185528800-185531800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
20 chr1:185528800-185531800 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr1:185528800-185531800 Enhancers Thymus Thymus
22 chr1:185528800-185532800 Enhancers Primary T helper cells PMA-I stimulated --
23 chr1:185529200-185535400 Weak transcription Small Intestine intestine
24 chr1:185529400-185531400 Enhancers Primary neutrophils fromperipheralblood blood
25 chr1:185529400-185533200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:185529400-185533800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:185529400-185534000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:185529400-185534000 Weak transcription Fetal Heart heart
29 chr1:185529400-185543000 Weak transcription Pancreas Pancrea
30 chr1:185529600-185535800 Weak transcription Fetal Intestine Large intestine
31 chr1:185530400-185535000 Weak transcription Primary B cells from cord blood blood
32 chr1:185530400-185535400 Weak transcription Duodenum Mucosa Duodenum
33 chr1:185530400-185536000 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr1:185530600-185531000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
35 chr1:185530600-185531200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:185530600-185531200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
37 chr1:185530600-185531200 Enhancers HMEC breast
38 chr1:185530600-185531400 Enhancers NHEK skin
39 chr1:185530600-185531600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:185530600-185531800 Enhancers Placenta Amnion Placenta Amnion
41 chr1:185530800-185531000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
42 chr1:185530800-185531000 Enhancers Primary T killer memory cells from peripheral blood blood
43 chr1:185530800-185531000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:185530800-185531800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:185530800-185533000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:185530800-185533400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:185530800-185535800 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr1:185530800-185536600 Weak transcription Left Ventricle heart
49 chr1:185530800-185544000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015