Variant report

Variant	rs72731745
Chromosome Location	chr9:73611611-73611612
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1362825	0.85[ASN][1000 genomes]
rs1411164	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17520753	0.95[ASN][1000 genomes]
rs17521958	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17593251	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs67854625	1.00[AFR][1000 genomes]
rs72729794	1.00[AFR][1000 genomes]
rs72729796	1.00[AFR][1000 genomes]
rs72729798	1.00[AFR][1000 genomes]
rs72731752	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72731763	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72731767	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72731768	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72731779	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72731780	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs972386	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430072	chr9:73509677-73640530	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73604000-73614800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr9:73605200-73614000	Weak transcription	Osteobl	bone
3	chr9:73610000-73614800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr9:73610200-73613800	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr9:73610200-73616600	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr9:73610600-73613800	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr9:73610600-73619000	Weak transcription	Brain Substantia Nigra	brain
8	chr9:73610800-73614200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr9:73611000-73614000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr9:73611400-73614000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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