Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11139702	0.95[ASN][1000 genomes]
rs11139703	0.94[ASN][1000 genomes]
rs11139704	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11139705	0.94[ASN][1000 genomes]
rs11139707	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11139708	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11139709	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11139711	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11139716	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11139717	0.95[ASN][1000 genomes]
rs11139722	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11139723	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12236312	0.95[ASN][1000 genomes]
rs1332473	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17085735	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4510939	0.97[ASN][1000 genomes]
rs62579110	0.95[ASN][1000 genomes]
rs62579111	0.95[ASN][1000 genomes]
rs62579112	0.95[ASN][1000 genomes]
rs62579113	0.95[ASN][1000 genomes]
rs62579114	0.95[ASN][1000 genomes]
rs62579115	0.95[ASN][1000 genomes]
rs62579116	0.95[ASN][1000 genomes]
rs62579117	0.95[ASN][1000 genomes]
rs62579137	0.97[ASN][1000 genomes]
rs6559680	0.97[ASN][1000 genomes]
rs72737494	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72737498	0.95[ASN][1000 genomes]
rs7869575	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428539	chr9:85240027-85402367	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85342000-85347400	Weak transcription	Dnd41	blood
2	chr9:85345000-85349200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr9:85345600-85347600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr9:85345800-85347400	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr9:85345800-85347400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr9:85346000-85347200	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr9:85346000-85347600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr9:85346000-85351400	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr9:85346200-85347200	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr9:85346200-85347200	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr9:85346200-85347200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr9:85346400-85347400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr9:85347000-85348600	Enhancers	ES-I3 Cell Line	embryonic stem cell

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