The 2.0 version of rSNPBase

Variant report

Variant rs72747031
Chromosome Location chr1:211908501-211908502
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211879200-211913600 Weak transcription Right Atrium heart
2 chr1:211896400-211909000 Weak transcription Fetal Intestine Small intestine
3 chr1:211903800-211908600 Weak transcription Lung lung
4 chr1:211904600-211912600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:211904600-211913800 Enhancers Brain Inferior Temporal Lobe brain
6 chr1:211904800-211913400 Enhancers Brain Substantia Nigra brain
7 chr1:211905400-211910600 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr1:211905400-211910800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr1:211905600-211908600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:211905600-211910400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:211905800-211910400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:211906400-211908600 Weak transcription HSMMtube muscle
13 chr1:211906800-211909200 Enhancers Brain Hippocampus Middle brain
14 chr1:211906800-211912400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:211907000-211920800 Weak transcription Aorta Aorta
16 chr1:211907200-211909200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:211907200-211909800 Enhancers Stomach Mucosa stomach
18 chr1:211907600-211908800 Enhancers Rectal Mucosa Donor 31 rectum
19 chr1:211907600-211909000 Enhancers Brain Cingulate Gyrus brain
20 chr1:211907600-211909200 Flanking Active TSS A549 lung
21 chr1:211907600-211909200 Bivalent Enhancer HepG2 liver
22 chr1:211907600-211909400 Enhancers Pancreas Pancrea
23 chr1:211907600-211909800 Enhancers K562 blood
24 chr1:211907800-211908600 Enhancers Hela-S3 cervix
25 chr1:211907800-211908600 Enhancers NHEK skin
26 chr1:211907800-211910800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:211907800-211910800 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr1:211907800-211914400 Enhancers Brain Anterior Caudate brain
29 chr1:211908000-211913200 Enhancers Brain Angular Gyrus brain
30 chr1:211908200-211908600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:211908200-211909600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:211908200-211910000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:211908200-211911200 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr1:211908400-211908600 Enhancers ES-WA7 Cell Line embryonic stem cell
35 chr1:211908400-211908800 Enhancers HUES64 Cell Line embryonic stem cell
36 chr1:211908400-211908800 Enhancers Colonic Mucosa Colon
37 chr1:211908400-211908800 Enhancers Rectal Mucosa Donor 29 rectum
38 chr1:211908400-211908800 Enhancers Small Intestine intestine
39 chr1:211908400-211909000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr1:211908400-211909200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:211908400-211909200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
42 chr1:211908400-211909600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:211908400-211909600 Enhancers Cortex derived primary cultured neurospheres brain
44 chr1:211908400-211909600 Enhancers Esophagus oesophagus
45 chr1:211908400-211909800 Enhancers HUES6 Cell Line embryonic stem cell
46 chr1:211908400-211909800 Enhancers HUVEC blood vessel
47 chr1:211908400-211910000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:211908400-211910200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:211908400-211910800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:211908400-211912800 Enhancers HMEC breast

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Last update: Aug 31, 2015