The 2.0 version of rSNPBase

Variant report

Variant rs12145346
Chromosome Location chr1:211925458-211925459
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211909400-211939200 Weak transcription Ovary ovary
2 chr1:211909600-211939400 Weak transcription Esophagus oesophagus
3 chr1:211911800-211927400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:211912400-211925600 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr1:211912600-211964600 Weak transcription NHEK skin
6 chr1:211912800-211970200 Weak transcription HMEC breast
7 chr1:211913800-211967800 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr1:211913800-211968800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:211913800-211969600 Weak transcription Small Intestine intestine
10 chr1:211914000-211949600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:211914000-211960400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:211914000-211965400 Weak transcription Thymus Thymus
13 chr1:211914000-211973600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:211914200-211947600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:211914400-211925800 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:211915800-211991800 Weak transcription Muscle Satellite Cultured Cells --
17 chr1:211916200-211965400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:211916800-211994200 Weak transcription Fetal Brain Male brain
19 chr1:211917000-211926400 Weak transcription K562 blood
20 chr1:211917000-211970400 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr1:211917600-211934800 Weak transcription Colon Smooth Muscle Colon
22 chr1:211918800-211927200 Weak transcription Fetal Heart heart
23 chr1:211918800-211930800 Weak transcription Fetal Lung lung
24 chr1:211919000-211931200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr1:211919200-212001200 Weak transcription Gastric stomach
26 chr1:211919800-211926400 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr1:211920000-211928000 Strong transcription Primary monocytes fromperipheralblood blood
28 chr1:211920200-211927800 Strong transcription Primary B cells from cord blood blood
29 chr1:211920400-211931800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:211920600-211925800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr1:211922600-211965600 Weak transcription Osteobl bone
32 chr1:211922800-211927200 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr1:211922800-211929400 Weak transcription Spleen Spleen
34 chr1:211922800-211932200 Weak transcription Placenta Amnion Placenta Amnion
35 chr1:211922800-211939200 Weak transcription HSMMtube muscle
36 chr1:211922800-211956200 Weak transcription HUVEC blood vessel
37 chr1:211922800-211963000 Weak transcription Hela-S3 cervix
38 chr1:211922800-211964800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:211922800-211965400 Weak transcription Right Ventricle heart
40 chr1:211923000-211927000 Weak transcription Brain Germinal Matrix brain
41 chr1:211923000-211939200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:211923000-211939200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:211923000-211951800 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:211923000-211967200 Weak transcription Colonic Mucosa Colon
45 chr1:211923000-211991800 Weak transcription HSMM muscle
46 chr1:211923200-211925600 Weak transcription Fetal Intestine Small intestine
47 chr1:211923200-211939200 Weak transcription Fetal Stomach stomach
48 chr1:211923200-211963400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:211923200-211967200 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr1:211923400-211929800 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015