The 2.0 version of rSNPBase

Variant report

Variant rs12562791
Chromosome Location chr1:212000306-212000307
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211919200-212001200 Weak transcription Gastric stomach
2 chr1:211924000-212002400 Weak transcription NHLF lung
3 chr1:211939800-212002400 Weak transcription HSMMtube muscle
4 chr1:211940000-212000600 Weak transcription Rectal Smooth Muscle rectum
5 chr1:211947400-212002400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:211952200-212003000 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:211957600-212000800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:211961200-212002200 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr1:211965800-212002200 Weak transcription Primary T cells from cord blood blood
10 chr1:211966400-212002400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:211971800-212002400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:211974000-212001200 Weak transcription Small Intestine intestine
13 chr1:211979400-212000600 Weak transcription Aorta Aorta
14 chr1:211983000-212002400 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr1:211983200-212002400 Weak transcription Thymus Thymus
16 chr1:211984600-212002400 Weak transcription NH-A brain
17 chr1:211984800-212002000 Weak transcription HUVEC blood vessel
18 chr1:211984800-212002400 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr1:211986200-212000600 Weak transcription HepG2 liver
20 chr1:211986200-212000800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr1:211986200-212001000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr1:211986200-212001000 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr1:211986200-212001000 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:211986200-212002400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr1:211986200-212002800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:211986400-212001400 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:211986800-212001000 Weak transcription Hela-S3 cervix
28 chr1:211987200-212002400 Weak transcription HMEC breast
29 chr1:211987400-212000600 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:211987800-212001000 Weak transcription Psoas Muscle Psoas
31 chr1:211988000-212000600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr1:211988000-212000800 Weak transcription Colon Smooth Muscle Colon
33 chr1:211988200-212002400 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:211988400-212002000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr1:211988600-212000600 Weak transcription Pancreas Pancrea
36 chr1:211988600-212002400 Weak transcription Stomach Smooth Muscle stomach
37 chr1:211989600-212002800 Weak transcription Lung lung
38 chr1:211991200-212001000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:211991200-212002600 Weak transcription Placenta Placenta
40 chr1:211992200-212002400 Weak transcription Primary T cells fromperipheralblood blood
41 chr1:211993000-212000600 Weak transcription Adipose Nuclei Adipose
42 chr1:211993200-212001200 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr1:211993200-212002200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:211993400-212001000 Weak transcription Ovary ovary
45 chr1:211993600-212000600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:211993600-212000600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr1:211993600-212000600 Weak transcription Dnd41 blood
48 chr1:211994600-212000600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr1:211995000-212000600 Weak transcription Fetal Brain Male brain
50 chr1:211995000-212002800 Weak transcription Fetal Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015