The 2.0 version of rSNPBase

Variant report

Variant rs11119805
Chromosome Location chr1:211918244-211918245
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211907000-211920800 Weak transcription Aorta Aorta
2 chr1:211908800-211920800 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:211908800-211920800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:211909200-211920200 Weak transcription Fetal Intestine Large intestine
5 chr1:211909200-211922200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:211909400-211920800 Weak transcription Pancreas Pancrea
7 chr1:211909400-211921000 Weak transcription Duodenum Mucosa Duodenum
8 chr1:211909400-211921600 Weak transcription Fetal Intestine Small intestine
9 chr1:211909400-211939200 Weak transcription Ovary ovary
10 chr1:211909600-211921400 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr1:211909600-211922000 Weak transcription Placenta Placenta
12 chr1:211909600-211922400 Weak transcription HSMM muscle
13 chr1:211909600-211923600 Weak transcription NHDF-Ad bronchial
14 chr1:211909600-211939400 Weak transcription Esophagus oesophagus
15 chr1:211909800-211919200 Enhancers Brain Hippocampus Middle brain
16 chr1:211909800-211919400 Enhancers Brain Cingulate Gyrus brain
17 chr1:211909800-211920000 Weak transcription Adipose Nuclei Adipose
18 chr1:211909800-211921400 Weak transcription HSMMtube muscle
19 chr1:211909800-211922200 Weak transcription HUVEC blood vessel
20 chr1:211911200-211920200 Weak transcription Fetal Muscle Leg muscle
21 chr1:211911200-211920800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:211911400-211920200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:211911800-211921000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:211911800-211927400 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr1:211912400-211920800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:211912400-211922000 Weak transcription Brain Germinal Matrix brain
27 chr1:211912400-211922000 Weak transcription Right Ventricle heart
28 chr1:211912400-211925600 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr1:211912600-211920800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:211912600-211920800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:211912600-211920800 Weak transcription Fetal Stomach stomach
32 chr1:211912600-211920800 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr1:211912600-211921000 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:211912600-211921800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:211912600-211964600 Weak transcription NHEK skin
36 chr1:211912800-211920400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:211912800-211970200 Weak transcription HMEC breast
38 chr1:211913200-211920200 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr1:211913200-211920800 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:211913400-211919400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:211913400-211920000 Weak transcription Primary monocytes fromperipheralblood blood
42 chr1:211913400-211920200 Weak transcription Primary B cells from cord blood blood
43 chr1:211913400-211922400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:211913600-211920800 Weak transcription Primary T cells from cord blood blood
45 chr1:211913600-211920800 Weak transcription Lung lung
46 chr1:211913800-211920200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:211913800-211920200 Weak transcription Primary hematopoietic stem cells blood
48 chr1:211913800-211920800 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:211913800-211922200 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr1:211913800-211922400 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015