The 2.0 version of rSNPBase

Variant report

Variant rs12145721
Chromosome Location chr1:212001353-212001354
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211924000-212002400 Weak transcription NHLF lung
2 chr1:211939800-212002400 Weak transcription HSMMtube muscle
3 chr1:211947400-212002400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:211952200-212003000 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:211961200-212002200 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr1:211965800-212002200 Weak transcription Primary T cells from cord blood blood
7 chr1:211966400-212002400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:211971800-212002400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:211983000-212002400 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr1:211983200-212002400 Weak transcription Thymus Thymus
11 chr1:211984600-212002400 Weak transcription NH-A brain
12 chr1:211984800-212002000 Weak transcription HUVEC blood vessel
13 chr1:211984800-212002400 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr1:211986200-212002400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr1:211986200-212002800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr1:211986400-212001400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr1:211987200-212002400 Weak transcription HMEC breast
18 chr1:211988200-212002400 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:211988400-212002000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:211988600-212002400 Weak transcription Stomach Smooth Muscle stomach
21 chr1:211989600-212002800 Weak transcription Lung lung
22 chr1:211991200-212002600 Weak transcription Placenta Placenta
23 chr1:211992200-212002400 Weak transcription Primary T cells fromperipheralblood blood
24 chr1:211993200-212002200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:211995000-212002800 Weak transcription Fetal Lung lung
26 chr1:211997200-212002400 Weak transcription Fetal Kidney kidney
27 chr1:211997800-212002400 Weak transcription Fetal Stomach stomach
28 chr1:211997800-212002600 Weak transcription Colonic Mucosa Colon
29 chr1:211997800-212003000 Weak transcription Esophagus oesophagus
30 chr1:211997800-212003000 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:211998000-212002400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:211998400-212002400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:211999400-212002400 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr1:211999400-212002800 Active TSS GM12878-XiMat blood
35 chr1:211999400-212004400 Active TSS Fetal Intestine Small intestine
36 chr1:211999600-212002400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr1:211999600-212002400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:211999600-212002400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr1:211999600-212002400 Active TSS Fetal Intestine Large intestine
40 chr1:211999600-212002400 Weak transcription Osteobl bone
41 chr1:211999800-212002400 Weak transcription HSMM muscle
42 chr1:212000000-212002400 Weak transcription Muscle Satellite Cultured Cells --
43 chr1:212000000-212002400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:212000000-212002400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:212000000-212002400 Weak transcription NHDF-Ad bronchial
46 chr1:212000000-212002400 Weak transcription NHEK skin
47 chr1:212000000-212002600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:212000200-212001600 Flanking Active TSS Fetal Brain Female brain
49 chr1:212000200-212002000 Enhancers Fetal Heart heart
50 chr1:212000200-212002400 Enhancers Brain Germinal Matrix brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015