Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:7356720..7358394-chr2:7363396..7365011,2	MCF-7	breast:
2	chr2:7351513..7354942-chr2:7355238..7358059,3	K562	blood:
3	chr2:7355894..7358751-chr2:7359246..7361556,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1525493	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1525497	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16866001	1.00[ASN][1000 genomes]
rs16866005	1.00[ASN][1000 genomes]
rs16866021	1.00[ASN][1000 genomes]
rs17628624	0.84[EUR][1000 genomes]
rs55947224	0.81[EUR][1000 genomes]
rs56083950	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56094154	0.81[EUR][1000 genomes]
rs56151241	0.84[EUR][1000 genomes]
rs56253063	0.81[EUR][1000 genomes]
rs57487804	1.00[ASN][1000 genomes]
rs6739710	1.00[ASN][1000 genomes]
rs72770034	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72770043	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72770047	0.84[EUR][1000 genomes]
rs72770054	0.84[EUR][1000 genomes]
rs72770062	0.84[EUR][1000 genomes]
rs72785663	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72785665	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7566298	1.00[ASN][1000 genomes]
rs7574754	0.83[EUR][1000 genomes]
rs7603409	1.00[ASN][1000 genomes]
rs940769	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915888	chr2:7197783-7461967	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1000136	chr2:7337270-7379211	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
3	nsv833337	chr2:7337273-7521146	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv3356103	chr2:7356968-7357423	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:7350400-7365400	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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