Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs17443704	0.93[EUR][1000 genomes]
rs17545590	1.00[ASN][1000 genomes]
rs17735797	1.00[ASN][1000 genomes]
rs2042205	1.00[ASN][1000 genomes]
rs2112538	0.81[EUR][1000 genomes]
rs55724355	1.00[ASN][1000 genomes]
rs56044017	0.93[EUR][1000 genomes]
rs72791443	1.00[ASN][1000 genomes]
rs72804364	0.93[EUR][1000 genomes]
rs72804371	0.93[EUR][1000 genomes]
rs72806351	0.84[EUR][1000 genomes]
rs72806361	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806362	1.00[ASN][1000 genomes]
rs72806363	0.85[EUR][1000 genomes]
rs72806364	0.84[EUR][1000 genomes]
rs72806368	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806400	1.00[ASN][1000 genomes]
rs72806402	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72808307	0.81[EUR][1000 genomes]
rs72808320	1.00[ASN][1000 genomes]
rs766895	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023828	chr5:151522149-151956217	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv830519	chr5:151588627-151800192	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151651400-151657200	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr5:151651800-151657200	Weak transcription	Aorta	Aorta
3	chr5:151656800-151657600	Enhancers	Pancreatic Islets	Pancreatic Islet
4	chr5:151657000-151657400	Bivalent Enhancer	Fetal Brain Male	brain

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