Variant report

Variant	rs728292
Chromosome Location	chr4:47357480-47357481
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11737034	1.00[CEU][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap]
rs12331254	0.80[CEU][hapmap]
rs17571554	1.00[JPT][hapmap]
rs4356893	1.00[JPT][hapmap]
rs6447550	0.87[CEU][hapmap]
rs6812354	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs6830892	0.85[YRI][hapmap]
rs6848790	0.96[CEU][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs6854906	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs728293	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs7688710	1.00[JPT][hapmap]
rs956412	1.00[CEU][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998919	chr4:47207023-47476876	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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