Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12954824	0.81[ASN][1000 genomes]
rs17694970	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs237972	0.83[ASN][1000 genomes]
rs346238	0.83[ASN][1000 genomes]
rs4243264	0.90[ASN][1000 genomes]
rs4312390	0.90[ASN][1000 genomes]
rs4503884	0.90[ASN][1000 genomes]
rs4533372	0.90[ASN][1000 genomes]
rs4575617	0.90[ASN][1000 genomes]
rs55755544	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55843226	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55967412	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56128741	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58180185	0.85[EUR][1000 genomes]
rs7232069	0.90[ASN][1000 genomes]
rs72893563	0.83[ASN][1000 genomes]
rs72893564	0.83[ASN][1000 genomes]
rs72893569	0.83[ASN][1000 genomes]
rs72893572	0.83[ASN][1000 genomes]
rs72893580	0.90[ASN][1000 genomes]
rs72893582	0.90[ASN][1000 genomes]
rs72893596	0.90[ASN][1000 genomes]
rs72895337	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72895341	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72895352	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72907077	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3447158	chr18:40045478-40320720	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:40176800-40177400	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr18:40177000-40177200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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