Variant report

Variant	rs72897783
Chromosome Location	chr2:67718335-67718336
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs57865584	1.00[EUR][1000 genomes]
rs6546295	1.00[EUR][1000 genomes]
rs6546305	1.00[EUR][1000 genomes]
rs6710320	1.00[EUR][1000 genomes]
rs6730868	1.00[EUR][1000 genomes]
rs6736634	1.00[EUR][1000 genomes]
rs6736949	1.00[EUR][1000 genomes]
rs72899940	1.00[EUR][1000 genomes]
rs72901900	1.00[EUR][1000 genomes]
rs7588812	1.00[EUR][1000 genomes]
rs7599464	1.00[EUR][1000 genomes]
rs7606755	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534389	chr2:67388428-68225338	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
2	esv3335541	chr2:67577544-67773907	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67713200-67727800	Weak transcription	Pancreas	Pancrea
2	chr2:67717000-67722400	Weak transcription	Fetal Stomach	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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