The 2.0 version of rSNPBase

Variant report

Variant rs72897837
Chromosome Location chr3:28305626-28305627
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:28283800-28311400 Weak transcription Lung lung
2 chr3:28284000-28309600 Weak transcription Fetal Muscle Leg muscle
3 chr3:28284000-28313800 Weak transcription Ovary ovary
4 chr3:28284000-28317200 Weak transcription Gastric stomach
5 chr3:28284400-28305800 Weak transcription Hela-S3 cervix
6 chr3:28284400-28311000 Weak transcription Fetal Intestine Small intestine
7 chr3:28284400-28312600 Weak transcription Fetal Lung lung
8 chr3:28284400-28321800 Weak transcription NHLF lung
9 chr3:28284600-28306000 Weak transcription A549 lung
10 chr3:28284600-28307200 Weak transcription Fetal Intestine Large intestine
11 chr3:28284600-28311200 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr3:28285600-28315400 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr3:28285800-28311000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr3:28286000-28306000 Weak transcription K562 blood
15 chr3:28286000-28307200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr3:28287600-28317000 Weak transcription Pancreas Pancrea
17 chr3:28288600-28311200 Weak transcription Esophagus oesophagus
18 chr3:28291400-28311200 Weak transcription Aorta Aorta
19 chr3:28292200-28305800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr3:28292800-28311000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr3:28293600-28311200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr3:28293800-28305800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr3:28293800-28309800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr3:28294000-28309200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr3:28294200-28314400 Weak transcription HepG2 liver
26 chr3:28294400-28313800 Weak transcription H1 Cell Line embryonic stem cell
27 chr3:28294400-28314200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr3:28294600-28313800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr3:28294800-28313800 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr3:28294800-28316400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr3:28295000-28312200 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr3:28295600-28313800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr3:28295600-28318200 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr3:28298200-28309000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr3:28300000-28313800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr3:28300600-28311400 Weak transcription Brain Anterior Caudate brain
37 chr3:28301000-28313800 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr3:28301800-28314000 Weak transcription Brain Angular Gyrus brain
39 chr3:28302200-28313800 Weak transcription Primary B cells from peripheral blood blood
40 chr3:28302600-28309400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr3:28302600-28313800 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr3:28303000-28314600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr3:28303000-28316800 Weak transcription Right Ventricle heart
44 chr3:28303200-28310000 Weak transcription Psoas Muscle Psoas
45 chr3:28303400-28322200 Weak transcription Small Intestine intestine
46 chr3:28303600-28313800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr3:28303600-28340600 Weak transcription NHEK skin
48 chr3:28303800-28307000 Weak transcription Brain Germinal Matrix brain
49 chr3:28303800-28311200 Weak transcription Fetal Muscle Trunk muscle
50 chr3:28303800-28311400 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015