The 2.0 version of rSNPBase

Variant report

Variant rs72897867
Chromosome Location chr3:28316901-28316902
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:28284000-28317200 Weak transcription Gastric stomach
2 chr3:28284400-28321800 Weak transcription NHLF lung
3 chr3:28287600-28317000 Weak transcription Pancreas Pancrea
4 chr3:28295600-28318200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr3:28303400-28322200 Weak transcription Small Intestine intestine
6 chr3:28303600-28340600 Weak transcription NHEK skin
7 chr3:28303800-28320800 Weak transcription Placenta Placenta
8 chr3:28304200-28332400 Weak transcription Rectal Smooth Muscle rectum
9 chr3:28305600-28322600 Weak transcription Osteobl bone
10 chr3:28306400-28332400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr3:28306600-28335800 Weak transcription Hela-S3 cervix
12 chr3:28307400-28317400 Weak transcription H9 Cell Line embryonic stem cell
13 chr3:28307600-28317000 Weak transcription Fetal Thymus thymus
14 chr3:28309000-28336600 Weak transcription HUVEC blood vessel
15 chr3:28309400-28317000 Weak transcription HSMM muscle
16 chr3:28309600-28317000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr3:28310000-28317000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr3:28310400-28321200 Weak transcription Muscle Satellite Cultured Cells --
19 chr3:28311200-28317200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr3:28311400-28319000 Weak transcription Spleen Spleen
21 chr3:28311600-28317000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr3:28311600-28317000 Weak transcription Aorta Aorta
23 chr3:28311600-28317000 Weak transcription Esophagus oesophagus
24 chr3:28311600-28319200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr3:28313400-28322800 Weak transcription Colonic Mucosa Colon
26 chr3:28313800-28317200 ZNF genes & repeats GM12878-XiMat blood
27 chr3:28314200-28332400 Weak transcription H1 Cell Line embryonic stem cell
28 chr3:28314400-28317000 Weak transcription Lung lung
29 chr3:28314400-28317600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr3:28314400-28318600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr3:28314400-28332400 Weak transcription Ovary ovary
32 chr3:28314400-28365400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:28314600-28317400 Strong transcription Primary monocytes fromperipheralblood blood
34 chr3:28314600-28332600 Weak transcription Left Ventricle heart
35 chr3:28314800-28343400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr3:28315000-28317000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr3:28315000-28332400 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr3:28315000-28333000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr3:28315000-28363000 Weak transcription A549 lung
40 chr3:28315200-28332200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr3:28315400-28320800 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr3:28315600-28317000 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr3:28315600-28319200 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr3:28315600-28325800 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr3:28315600-28326400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr3:28315600-28332400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr3:28315600-28332400 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr3:28315600-28332400 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr3:28315800-28317600 ZNF genes & repeats Fetal Muscle Leg muscle
50 chr3:28315800-28318200 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015