Variant report
| Variant | rs72913180 |
|---|---|
| Chromosome Location | chr18:44760213-44760214 |
| allele | A/G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:51)
| rs_ID | r2[population] |
|---|---|
| rs16950662 | 1.00[ASN][1000 genomes] |
| rs16950719 | 1.00[ASN][1000 genomes] |
| rs16950736 | 1.00[ASN][1000 genomes] |
| rs16950741 | 1.00[ASN][1000 genomes] |
| rs16950744 | 1.00[ASN][1000 genomes] |
| rs16950754 | 1.00[ASN][1000 genomes] |
| rs16950767 | 1.00[ASN][1000 genomes] |
| rs16950777 | 1.00[ASN][1000 genomes] |
| rs55704228 | 1.00[ASN][1000 genomes] |
| rs55977647 | 1.00[ASN][1000 genomes] |
| rs56014831 | 1.00[ASN][1000 genomes] |
| rs72906489 | 1.00[ASN][1000 genomes] |
| rs72906494 | 1.00[ASN][1000 genomes] |
| rs72906498 | 1.00[ASN][1000 genomes] |
| rs72908505 | 1.00[ASN][1000 genomes] |
| rs72908507 | 1.00[ASN][1000 genomes] |
| rs72908508 | 1.00[ASN][1000 genomes] |
| rs72908518 | 1.00[ASN][1000 genomes] |
| rs72908529 | 1.00[ASN][1000 genomes] |
| rs72908533 | 1.00[ASN][1000 genomes] |
| rs72908537 | 1.00[ASN][1000 genomes] |
| rs72908538 | 1.00[ASN][1000 genomes] |
| rs72908542 | 1.00[ASN][1000 genomes] |
| rs72908558 | 1.00[ASN][1000 genomes] |
| rs72909289 | 0.81[EUR][1000 genomes] |
| rs72911203 | 0.81[EUR][1000 genomes] |
| rs72911205 | 0.81[EUR][1000 genomes] |
| rs72911207 | 0.81[EUR][1000 genomes] |
| rs72913164 | 1.00[EUR][1000 genomes] |
| rs72913166 | 1.00[EUR][1000 genomes] |
| rs72913178 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72913186 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72913187 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914803 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914805 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914809 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914811 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914814 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914818 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914820 | 0.87[EUR][1000 genomes] |
| rs72914823 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914829 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914834 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914837 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914843 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72914847 | 1.00[ASN][1000 genomes] |
| rs72914848 | 1.00[ASN][1000 genomes] |
| rs72914856 | 1.00[ASN][1000 genomes] |
| rs72914857 | 1.00[ASN][1000 genomes] |
| rs72914862 | 1.00[ASN][1000 genomes] |
| rs8095903 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:44757800-44762800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 2 | chr18:44760200-44761600 | Enhancers | HepG2 | liver |
