Variant report

Variant	rs72926732
Chromosome Location	chr4:103264992-103264993
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:103264616..103268649-chr4:103270354..103274790,5	K562	blood:
2	chr4:103264486..103268305-chr4:103421576..103425286,5	K562	blood:
3	chr4:103264289..103266526-chr4:103747342..103750313,2	K562	blood:
4	chr4:103263099..103266958-chr4:103348980..103352984,5	K562	blood:

Variant related genes	Relation type
ENSG00000248161	Chromatin interaction
ENSG00000260651	Chromatin interaction
ENSG00000109320	Chromatin interaction
ENSG00000138821	Chromatin interaction
ENSG00000109332	Chromatin interaction
ENSG00000246560	Chromatin interaction

rs_ID	r²[population]
rs28481751	1.00[EUR][1000 genomes]
rs57016073	1.00[EUR][1000 genomes]
rs57040664	1.00[EUR][1000 genomes]
rs57614926	1.00[EUR][1000 genomes]
rs58142893	1.00[EUR][1000 genomes]
rs58282159	1.00[EUR][1000 genomes]
rs58546232	1.00[EUR][1000 genomes]
rs61373170	1.00[EUR][1000 genomes]
rs6815747	1.00[EUR][1000 genomes]
rs72924893	1.00[EUR][1000 genomes]
rs72926296	1.00[EUR][1000 genomes]
rs72926703	1.00[EUR][1000 genomes]
rs72926707	1.00[EUR][1000 genomes]
rs72926713	1.00[EUR][1000 genomes]
rs72926715	1.00[EUR][1000 genomes]
rs72926725	1.00[EUR][1000 genomes]
rs72926726	1.00[EUR][1000 genomes]
rs72926740	1.00[EUR][1000 genomes]
rs72926745	1.00[EUR][1000 genomes]
rs72928303	1.00[EUR][1000 genomes]
rs72928311	1.00[EUR][1000 genomes]
rs72928321	1.00[EUR][1000 genomes]
rs72928331	1.00[EUR][1000 genomes]
rs72928338	1.00[EUR][1000 genomes]
rs72928340	1.00[EUR][1000 genomes]
rs72928341	1.00[EUR][1000 genomes]
rs72930217	1.00[EUR][1000 genomes]
rs72930218	1.00[EUR][1000 genomes]
rs7660242	1.00[EUR][1000 genomes]

Chromatin state (count:93 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103258800-103265000	Weak transcription	Pancreas	Pancrea
2	chr4:103259000-103265000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr4:103261000-103265000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr4:103261000-103265000	Weak transcription	Ovary	ovary
5	chr4:103261800-103265200	Weak transcription	Stomach Mucosa	stomach
6	chr4:103262600-103265000	Weak transcription	HSMM	muscle
7	chr4:103263000-103265000	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr4:103263200-103265200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
9	chr4:103263400-103265200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr4:103263400-103266800	Active TSS	Lung	lung
11	chr4:103263400-103266800	Active TSS	GM12878-XiMat	blood
12	chr4:103263600-103265400	Flanking Active TSS	K562	blood
13	chr4:103263600-103267600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr4:103263800-103265000	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
15	chr4:103263800-103265400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
16	chr4:103263800-103265800	Flanking Active TSS	Primary hematopoietic stem cells	blood
17	chr4:103263800-103267000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr4:103264000-103265000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr4:103264000-103265000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr4:103264000-103265000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
21	chr4:103264000-103265200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr4:103264000-103265200	Enhancers	Sigmoid Colon	Sigmoid Colon
23	chr4:103264000-103266000	Active TSS	Placenta	Placenta
24	chr4:103264000-103266800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr4:103264000-103267000	Active TSS	Hela-S3	cervix
26	chr4:103264200-103265000	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr4:103264200-103265000	Enhancers	Primary B cells from peripheral blood	blood
28	chr4:103264200-103265000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr4:103264200-103265000	Enhancers	Fetal Intestine Large	intestine
30	chr4:103264200-103265200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr4:103264200-103265200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
32	chr4:103264200-103265600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
33	chr4:103264200-103266800	Active TSS	H9 Cell Line	embryonic stem cell
34	chr4:103264200-103266800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr4:103264200-103267000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr4:103264400-103265000	Enhancers	Colonic Mucosa	Colon
37	chr4:103264400-103265400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
38	chr4:103264400-103266000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
39	chr4:103264400-103266800	Active TSS	Right Atrium	heart
40	chr4:103264400-103267400	Active TSS	A549	lung
41	chr4:103264600-103265000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr4:103264600-103265000	Enhancers	Breast Myoepithelial Primary Cells	Breast
43	chr4:103264600-103265000	Enhancers	Primary monocytes fromperipheralblood	blood
44	chr4:103264600-103265000	Enhancers	Primary neutrophils fromperipheralblood	blood
45	chr4:103264600-103265000	Enhancers	Brain Anterior Caudate	brain
46	chr4:103264600-103265000	Enhancers	Brain Hippocampus Middle	brain
47	chr4:103264600-103265000	Enhancers	HUVEC	blood vessel
48	chr4:103264600-103265200	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
49	chr4:103264600-103265200	Bivalent Enhancer	Fetal Intestine Small	intestine
50	chr4:103264600-103265200	Weak transcription	Placenta Amnion	Placenta Amnion

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