The 2.0 version of rSNPBase

Variant report

Variant rs72940209
Chromosome Location chr3:111650978-111650979
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111631000-111672000 Weak transcription Fetal Intestine Small intestine
2 chr3:111631000-111673400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr3:111635200-111665600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr3:111635600-111655200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr3:111637200-111690600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr3:111638600-111659200 Weak transcription Primary T cells fromperipheralblood blood
7 chr3:111639200-111675400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr3:111639800-111661000 Weak transcription Primary B cells from cord blood blood
9 chr3:111640000-111651800 Weak transcription Duodenum Mucosa Duodenum
10 chr3:111640200-111651200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr3:111641800-111658200 Weak transcription Ovary ovary
12 chr3:111642200-111674400 Weak transcription Lung lung
13 chr3:111642200-111690400 Weak transcription Spleen Spleen
14 chr3:111642800-111653600 Weak transcription NHDF-Ad bronchial
15 chr3:111642800-111654400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr3:111643000-111652800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr3:111643000-111654400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr3:111643000-111654400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr3:111643000-111654600 Weak transcription Fetal Lung lung
20 chr3:111643400-111653400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr3:111643400-111654400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr3:111643400-111655200 Weak transcription Stomach Mucosa stomach
23 chr3:111643400-111656200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr3:111643400-111657800 Weak transcription Gastric stomach
25 chr3:111643400-111658200 Weak transcription HepG2 liver
26 chr3:111643400-111660000 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr3:111643600-111651800 Weak transcription Small Intestine intestine
28 chr3:111643600-111654800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr3:111643600-111658000 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr3:111644600-111656200 Weak transcription Fetal Muscle Trunk muscle
31 chr3:111644800-111654400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr3:111645000-111652000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr3:111645000-111658600 Weak transcription Fetal Heart heart
34 chr3:111645200-111663600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr3:111645400-111651200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr3:111645400-111651600 Strong transcription NHEK skin
37 chr3:111645400-111651800 Weak transcription Fetal Intestine Large intestine
38 chr3:111645400-111652600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr3:111645400-111652600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr3:111645400-111654600 Weak transcription HSMMtube muscle
41 chr3:111645400-111655000 Weak transcription Fetal Kidney kidney
42 chr3:111645400-111656200 Weak transcription Fetal Stomach stomach
43 chr3:111645400-111665400 Weak transcription Right Atrium heart
44 chr3:111645400-111689600 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr3:111645600-111652000 Weak transcription Rectal Smooth Muscle rectum
46 chr3:111645600-111654800 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr3:111645800-111658400 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr3:111645800-111658400 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr3:111646000-111651600 Weak transcription Colon Smooth Muscle Colon
50 chr3:111646200-111651600 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015