The 2.0 version of rSNPBase

Variant report

Variant rs72943904
Chromosome Location chr3:112345759-112345760
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112312600-112346200 Weak transcription Rectal Smooth Muscle rectum
2 chr3:112312600-112347200 Weak transcription Fetal Intestine Large intestine
3 chr3:112330400-112346800 Strong transcription NHLF lung
4 chr3:112331200-112351600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr3:112331400-112354800 Weak transcription Psoas Muscle Psoas
6 chr3:112336200-112347400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr3:112336200-112351600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr3:112336400-112346800 Weak transcription Fetal Stomach stomach
9 chr3:112336600-112351400 Weak transcription Fetal Lung lung
10 chr3:112336600-112355800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr3:112337000-112346800 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr3:112338000-112349400 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr3:112338400-112346200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr3:112340800-112348200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr3:112341000-112346200 Weak transcription Aorta Aorta
16 chr3:112341000-112348400 Weak transcription Fetal Kidney kidney
17 chr3:112341400-112351400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr3:112341800-112347800 Strong transcription Placenta Amnion Placenta Amnion
19 chr3:112341800-112348000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr3:112341800-112348200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr3:112342200-112348200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr3:112342400-112346000 Weak transcription Colon Smooth Muscle Colon
23 chr3:112342400-112346600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr3:112342400-112348200 Strong transcription HSMM muscle
25 chr3:112342600-112350000 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr3:112342600-112359600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr3:112342800-112346000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr3:112342800-112346000 Weak transcription Brain Anterior Caudate brain
29 chr3:112342800-112346000 Weak transcription Stomach Smooth Muscle stomach
30 chr3:112342800-112346200 Weak transcription HSMMtube muscle
31 chr3:112342800-112348200 Weak transcription H9 Cell Line embryonic stem cell
32 chr3:112342800-112348200 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr3:112342800-112348200 Weak transcription A549 lung
34 chr3:112342800-112350000 Weak transcription H1 Cell Line embryonic stem cell
35 chr3:112343000-112347000 Strong transcription Muscle Satellite Cultured Cells --
36 chr3:112343000-112348200 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr3:112343000-112348200 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr3:112343000-112348600 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr3:112343000-112349600 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr3:112343000-112351600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr3:112343200-112348200 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr3:112343400-112346200 Weak transcription HUVEC blood vessel
43 chr3:112343400-112348200 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr3:112343400-112348200 Weak transcription Hela-S3 cervix
45 chr3:112343400-112358000 Weak transcription Pancreas Pancrea
46 chr3:112344200-112345800 Weak transcription NH-A brain
47 chr3:112344200-112348200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:112344200-112348200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr3:112344200-112348200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr3:112344400-112348200 Weak transcription HMEC breast

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Last update: Aug 31, 2015