Variant report
| Variant | rs72942080 |
|---|---|
| Chromosome Location | chr3:112330628-112330629 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:112282400-112340000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 2 | chr3:112298800-112335200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 3 | chr3:112300200-112331000 | Weak transcription | Lung | lung |
| 4 | chr3:112300200-112334000 | Weak transcription | Fetal Stomach | stomach |
| 5 | chr3:112305800-112334800 | Weak transcription | Aorta | Aorta |
| 6 | chr3:112311600-112331000 | Weak transcription | Psoas Muscle | Psoas |
| 7 | chr3:112312400-112331000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 8 | chr3:112312600-112346200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr3:112312600-112347200 | Weak transcription | Fetal Intestine Large | intestine |
| 10 | chr3:112316200-112342800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 11 | chr3:112316400-112333600 | Weak transcription | A549 | lung |
| 12 | chr3:112316600-112337600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 13 | chr3:112318000-112341800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 14 | chr3:112322200-112337200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 15 | chr3:112323400-112332400 | Strong transcription | Placenta Amnion | Placenta Amnion |
| 16 | chr3:112323800-112334600 | Weak transcription | Fetal Muscle Leg | muscle |
| 17 | chr3:112324400-112331200 | Strong transcription | Adipose Nuclei | Adipose |
| 18 | chr3:112324600-112331800 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 19 | chr3:112326000-112333400 | Weak transcription | Ovary | ovary |
| 20 | chr3:112327200-112331200 | Weak transcription | HUVEC | blood vessel |
| 21 | chr3:112327200-112331600 | Weak transcription | Fetal Lung | lung |
| 22 | chr3:112327800-112340600 | Weak transcription | Fetal Kidney | kidney |
| 23 | chr3:112328200-112332200 | Genic enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 24 | chr3:112328400-112332600 | Genic enhancers | Osteobl | bone |
| 25 | chr3:112328600-112332600 | Genic enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 26 | chr3:112329000-112331600 | Genic enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 27 | chr3:112329000-112334400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 28 | chr3:112329200-112333400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 29 | chr3:112329400-112331200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 30 | chr3:112329400-112333400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 31 | chr3:112329400-112333400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 32 | chr3:112329400-112334200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 33 | chr3:112329600-112331000 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 34 | chr3:112329600-112341800 | Strong transcription | HSMM | muscle |
| 35 | chr3:112329800-112331400 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 36 | chr3:112330000-112332000 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 37 | chr3:112330000-112335000 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 38 | chr3:112330000-112336600 | Strong transcription | NHDF-Ad | bronchial |
| 39 | chr3:112330200-112338400 | Strong transcription | HSMMtube | muscle |
| 40 | chr3:112330400-112331000 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 41 | chr3:112330400-112331000 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 42 | chr3:112330400-112331200 | Enhancers | H1 Cell Line | embryonic stem cell |
| 43 | chr3:112330400-112331400 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 44 | chr3:112330400-112331600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 45 | chr3:112330400-112331600 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 46 | chr3:112330400-112331800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 47 | chr3:112330400-112335000 | Strong transcription | NH-A | brain |
| 48 | chr3:112330400-112346800 | Strong transcription | NHLF | lung |
| 49 | chr3:112330600-112330800 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 50 | chr3:112330600-112331200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
