Variant report
Variant | rs72951771 |
---|---|
Chromosome Location | chr4:150187289-150187290 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11930355 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17026072 | 1.00[ASN][1000 genomes] |
rs17026111 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2164997 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4301085 | 1.00[AMR][1000 genomes] |
rs4510455 | 1.00[AMR][1000 genomes] |
rs56208724 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs58022888 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs59242740 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs59690219 | 1.00[AMR][1000 genomes] |
rs61133328 | 1.00[AMR][1000 genomes] |
rs72951795 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs72951797 | 1.00[AMR][1000 genomes] |
rs72951801 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs72953611 | 1.00[AMR][1000 genomes] |
rs72953613 | 1.00[AMR][1000 genomes] |
rs72953615 | 1.00[AMR][1000 genomes] |
rs72953627 | 1.00[AMR][1000 genomes] |
rs72953659 | 1.00[AMR][1000 genomes] |
rs72953662 | 1.00[AMR][1000 genomes] |
rs72953666 | 1.00[AMR][1000 genomes] |
rs72953668 | 1.00[AMR][1000 genomes] |
rs72953669 | 1.00[AMR][1000 genomes] |
rs72966027 | 1.00[AMR][1000 genomes] |
rs72966028 | 1.00[AMR][1000 genomes] |
rs72966031 | 1.00[AMR][1000 genomes] |
rs72966091 | 1.00[AMR][1000 genomes] |
rs72966101 | 1.00[AMR][1000 genomes] |
rs72967931 | 1.00[AMR][1000 genomes] |
rs73859724 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7678170 | 1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1022438 | chr4:150066349-150196711 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
2 | nsv880248 | chr4:150092178-150200706 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS | Chromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
3 | nsv880249 | chr4:150156579-150280221 | Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS | Chromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
4 | nsv1016977 | chr4:150173255-150605595 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
5 | nsv537298 | chr4:150173255-150605595 | Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:150186800-150187400 | Enhancers | Fetal Lung | lung |