Variant report

Variant	rs72954033
Chromosome Location	chr2:113622994-113622995
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10176689	1.00[EUR][1000 genomes]
rs10181385	1.00[EUR][1000 genomes]
rs10183049	1.00[EUR][1000 genomes]
rs1143626	1.00[EUR][1000 genomes]
rs1143641	1.00[EUR][1000 genomes]
rs13424846	1.00[EUR][1000 genomes]
rs2063918	1.00[EUR][1000 genomes]
rs28928281	1.00[EUR][1000 genomes]
rs28928283	1.00[EUR][1000 genomes]
rs4849116	1.00[EUR][1000 genomes]
rs60696592	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61134068	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61677777	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72950353	1.00[AMR][1000 genomes]
rs72950372	1.00[EUR][1000 genomes]
rs72954024	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72954034	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72954038	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7591401	1.00[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113619200-113623600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr2:113621800-113623600	Enhancers	Stomach Mucosa	stomach
3	chr2:113622800-113623000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr2:113622800-113624400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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