Variant report

Variant	rs7591401
Chromosome Location	chr2:113581150-113581151
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:113498169..113499774-chr2:113578682..113581202,2	K562	blood:
2	chr2:113580846..113583724-chr2:113602523..113605120,2	MCF-7	breast:
3	chr2:113573836..113575663-chr2:113580484..113583090,2	MCF-7	breast:

rs_ID	r²[population]
rs10176689	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10181385	1.00[EUR][1000 genomes]
rs10183049	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10190942	1.00[AMR][1000 genomes]
rs10206303	1.00[AMR][1000 genomes]
rs1143626	1.00[EUR][1000 genomes]
rs1143641	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13424846	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2063918	1.00[EUR][1000 genomes]
rs4849116	1.00[EUR][1000 genomes]
rs60696592	1.00[EUR][1000 genomes]
rs61134068	1.00[EUR][1000 genomes]
rs61677777	1.00[EUR][1000 genomes]
rs72950372	1.00[EUR][1000 genomes]
rs72954024	1.00[EUR][1000 genomes]
rs72954033	1.00[EUR][1000 genomes]
rs72954034	1.00[EUR][1000 genomes]
rs72954038	1.00[EUR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113571200-113581600	Weak transcription	Fetal Heart	heart
2	chr2:113572200-113581600	Weak transcription	Osteobl	bone
3	chr2:113572400-113581600	Weak transcription	NH-A	brain
4	chr2:113575000-113581600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr2:113575000-113581600	Weak transcription	Fetal Muscle Trunk	muscle
6	chr2:113576000-113581600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr2:113576200-113581400	Weak transcription	HMEC	breast
8	chr2:113576200-113581600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr2:113576200-113581600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr2:113577000-113581600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr2:113577000-113581600	Weak transcription	Pancreas	Pancrea
12	chr2:113579000-113581600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr2:113579200-113581600	Weak transcription	NHEK	skin
14	chr2:113579600-113581600	Weak transcription	Gastric	stomach
15	chr2:113579600-113581600	Weak transcription	Hela-S3	cervix
16	chr2:113579600-113581800	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr2:113579800-113581600	Weak transcription	GM12878-XiMat	blood
18	chr2:113579800-113581600	Weak transcription	HepG2	liver
19	chr2:113580000-113586800	Weak transcription	Primary neutrophils fromperipheralblood	blood
20	chr2:113580200-113581400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr2:113580200-113581600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
22	chr2:113580200-113581600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr2:113580200-113581800	Weak transcription	Primary hematopoietic stem cells	blood
24	chr2:113580400-113581600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
25	chr2:113580400-113581600	Weak transcription	Small Intestine	intestine
26	chr2:113580800-113581400	Weak transcription	HUVEC	blood vessel
27	chr2:113581000-113583600	Enhancers	Liver	Liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links