Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:113624073..113627729-chr2:113629143..113631937,4	K562	blood:
2	chr2:113609697..113611474-chr2:113622823..113625152,2	K562	blood:
3	chr2:113618582..113620673-chr2:113622972..113625537,2	K562	blood:

Variant related genes	Relation type
ENSG00000180152	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10176689	1.00[EUR][1000 genomes]
rs10181385	1.00[EUR][1000 genomes]
rs10183049	1.00[EUR][1000 genomes]
rs1143626	1.00[EUR][1000 genomes]
rs1143641	1.00[EUR][1000 genomes]
rs13424846	1.00[EUR][1000 genomes]
rs2063918	1.00[EUR][1000 genomes]
rs28928281	1.00[EUR][1000 genomes]
rs28928283	1.00[EUR][1000 genomes]
rs28928291	1.00[EUR][1000 genomes]
rs4849116	1.00[EUR][1000 genomes]
rs60696592	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61134068	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61677777	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72950353	1.00[AMR][1000 genomes]
rs72950372	1.00[EUR][1000 genomes]
rs72954024	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72954033	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72954038	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7591401	1.00[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113622800-113624400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
2	chr2:113623000-113625600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr2:113623600-113624400	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
4	chr2:113623600-113626800	Enhancers	Hela-S3	cervix
5	chr2:113624000-113624400	Enhancers	Stomach Mucosa	stomach
6	chr2:113624000-113625200	Weak transcription	Gastric	stomach
7	chr2:113624000-113625600	Weak transcription	Colonic Mucosa	Colon
8	chr2:113624000-113625600	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr2:113624000-113627200	Weak transcription	Brain Cingulate Gyrus	brain
10	chr2:113624200-113624400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr2:113624200-113625000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr2:113624200-113625000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr2:113624200-113625400	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr2:113624200-113626800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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