Variant report

Variant	rs72973965
Chromosome Location	chr2:209409360-209409361
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:209329724..209332689-chr2:209407248..209409868,2	K562	blood:
2	chr2:209405990..209410694-chr2:209410728..209415214,7	K562	blood:
3	chr2:209406410..209410199-chr2:209429309..209432294,3	K562	blood:
4	chr2:209405403..209410609-chr2:209410620..209413858,6	K562	blood:
5	chr2:209403578..209406285-chr2:209407356..209409474,2	K562	blood:

Variant related genes	Relation type
ENSG00000227430	Chromatin interaction

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10210510	1.00[EUR][1000 genomes]
rs13385546	1.00[EUR][1000 genomes]
rs55737358	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56111565	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56300252	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56300384	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57264535	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58006792	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58135941	1.00[EUR][1000 genomes]
rs60436815	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60549156	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61094477	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6742499	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72973961	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72973963	1.00[ASN][1000 genomes]
rs72979102	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981004	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981006	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981007	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981017	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981019	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981020	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981023	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981024	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981032	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981033	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981036	1.00[EUR][1000 genomes]
rs72981039	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981041	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981042	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981043	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72985935	1.00[ASN][1000 genomes]
rs73986605	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73986606	0.83[EUR][1000 genomes]
rs73986607	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73986608	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73986609	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986610	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986612	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986613	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986614	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986615	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986617	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986618	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986619	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986621	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73986622	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73987517	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73987539	1.00[ASN][1000 genomes]
rs9288395	1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:209406000-209410800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr2:209407800-209410200	Weak transcription	Stomach Mucosa	stomach
3	chr2:209407800-209410600	Active TSS	Fetal Kidney	kidney
4	chr2:209407800-209411400	Active TSS	K562	blood
5	chr2:209407800-209414400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr2:209409000-209410200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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