Variant report

Variant	rs72979102
Chromosome Location	chr2:209411474-209411475
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:209405403..209410609-chr2:209410620..209413858,6	K562	blood:
2	chr2:209410351..209412483-chr2:209432504..209434169,2	K562	blood:
3	chr2:209405990..209410694-chr2:209410728..209415214,7	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10210510	1.00[EUR][1000 genomes]
rs13385546	1.00[EUR][1000 genomes]
rs55737358	1.00[EUR][1000 genomes]
rs56111565	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56300252	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56300384	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57264535	1.00[EUR][1000 genomes]
rs58006792	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58135941	1.00[EUR][1000 genomes]
rs60436815	1.00[EUR][1000 genomes]
rs60549156	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61094477	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6742499	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72973961	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72973963	1.00[ASN][1000 genomes]
rs72973965	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981004	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981006	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981007	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981017	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981019	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981020	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981023	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981024	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981032	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981033	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981036	1.00[EUR][1000 genomes]
rs72981039	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981041	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981042	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981043	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72985935	1.00[ASN][1000 genomes]
rs73986605	0.83[EUR][1000 genomes]
rs73986606	0.83[EUR][1000 genomes]
rs73986607	0.83[EUR][1000 genomes]
rs73986608	0.83[EUR][1000 genomes]
rs73986609	1.00[EUR][1000 genomes]
rs73986610	1.00[EUR][1000 genomes]
rs73986612	1.00[EUR][1000 genomes]
rs73986613	1.00[EUR][1000 genomes]
rs73986614	1.00[EUR][1000 genomes]
rs73986615	1.00[EUR][1000 genomes]
rs73986617	1.00[EUR][1000 genomes]
rs73986618	1.00[EUR][1000 genomes]
rs73986619	1.00[EUR][1000 genomes]
rs73986621	1.00[EUR][1000 genomes]
rs73986622	1.00[EUR][1000 genomes]
rs73987517	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73987539	1.00[ASN][1000 genomes]
rs9288395	1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:209407800-209414400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:209410200-209411600	Enhancers	Fetal Intestine Large	intestine
3	chr2:209410200-209412400	Enhancers	Fetal Intestine Small	intestine
4	chr2:209410200-209412400	Enhancers	Stomach Mucosa	stomach
5	chr2:209410600-209412000	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr2:209410600-209414200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr2:209410800-209412800	Enhancers	Duodenum Mucosa	Duodenum
8	chr2:209410800-209412800	Weak transcription	Small Intestine	intestine
9	chr2:209411200-209414000	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr2:209411400-209413600	Weak transcription	K562	blood

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